RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 SMAD6O43541 496 aaKnown RBP16.98■□□□□ 0.31
FAM3A-222ENST00000621967 TRIM16O95361 564 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 IL6P05231 212 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 DRD1P21728 446 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 DCKP27707 260 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 GDF5P43026 501 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 MAPK8P45983 427 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 STK19P49842 368 aaPredicted RBP16.98■□□□□ 0.31
FAM3A-222ENST00000621967 ST8SIA6P61647 398 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CHRNB3Q05901 458 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 PMS2P3Q13401 168 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 GPR33Q49SQ1 333 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 METTL3Q86U44 580 aaKnown RBP16.98■□□□□ 0.31
FAM3A-222ENST00000621967 SFTPA1Q8IWL2 248 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 MSRB3Q8IXL7 192 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 RDH12Q96NR8 316 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 EGFL8Q99944 293 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CLMPQ9H6B4 373 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CARS2Q9HA77 564 aaKnown RBP16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CXorf21Q9HAI6 301 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 WNT16Q9UBV4 365 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CIDEBQ9UHD4 219 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 ERVW-1Q9UQF0 538 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 HS3ST2Q9Y278 367 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 ANGPTL3Q9Y5C1 460 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 TRBV5-3A0A0A0MS03 114 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CXorf51AA0A1B0GTR3 108 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 TRIM64BA6NI03 449 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 FFAR3O14843 346 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 GPR42O15529 346 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CLDN7O95471 211 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 NFKBIAP25963 317 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 HNF1BP35680 557 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 GNPDA1P46926 289 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CYP4F3Q08477 520 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 RAB39AQ14964 217 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 MAPKAPK3Q16644 382 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 FAM174BQ3ZCQ3 159 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 TMEM196Q5HYL7 178 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 ZNF852Q6ZMS4 543 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 UGT2B28Q9BY64 529 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 SLC29A3Q9BZD2 475 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 DPY30Q9C005 99 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 IKZF5Q9H5V7 419 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 FARSBQ9NSD9 589 aaKnown RBP16.98■□□□□ 0.31
FAM3A-222ENST00000621967 CDC14AQ9UNH5 594 aa16.98■□□□□ 0.31
FAM3A-222ENST00000621967 MANBAO00462 879 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 ULK1O75385 1050 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 CPNE6O95741 557 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 SRPRAP08240 638 aaKnown RBP16.97■□□□□ 0.31
FAM3A-222ENST00000621967 CD72P21854 359 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 UGT1A1P22309 533 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 UGT1A4P22310 534 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 UGT1A3P35503 534 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 UGT1A5P35504 534 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 SPAM1P38567 509 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 TNFRSF4P43489 277 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 CHRNA6Q15825 494 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 PLA2G4EQ3MJ16 856 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 FNDC3BQ53EP0 1204 aaKnown RBP16.97■□□□□ 0.31
FAM3A-222ENST00000621967 OTUD3Q5T2D3 398 aaPredicted RBP16.97■□□□□ 0.31
FAM3A-222ENST00000621967 NXPE1Q8N323 547 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 LIX1Q8N485 282 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 FAM86B1Q8N7N1 296 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 FAM81AQ8TBF8 368 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 SHDQ96IW2 340 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 CNDP2Q96KP4 475 aaKnown RBP16.97■□□□□ 0.31
FAM3A-222ENST00000621967 LYSMD1Q96S90 227 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 TUBA1CQ9BQE3 449 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 LRTM1Q9HBL6 345 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 SLC25A37Q9NYZ2 338 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 IFT80Q9P2H3 777 aaPredicted RBP16.97■□□□□ 0.31
FAM3A-222ENST00000621967 KLQ9UEF7 1012 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 CRLS1Q9UJA2 301 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 ZNF490Q9ULM2 529 aaPredicted RBP16.97■□□□□ 0.31
FAM3A-222ENST00000621967 AP3M1Q9Y2T2 418 aa16.97■□□□□ 0.31
FAM3A-222ENST00000621967 TRIOO75962 3097 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 GMNNO75496 209 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 EGFP01133 1207 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 PGRP06401 933 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 THRBP10828 461 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 SRCP12931 536 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 PIK3CGP48736 1102 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 PTPN5P54829 565 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 HMGCS1Q01581 520 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 NKG7Q16617 165 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 USP39Q53GS9 565 aaKnown RBP16.96■□□□□ 0.31
FAM3A-222ENST00000621967 RUNDC3AQ59EK9 446 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 CDKL4Q5MAI5 379 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 SPANXN4Q5MJ08 99 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 CACHD1Q5VU97 1274 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 SUSD1Q6UWL2 747 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 KCTD8Q6ZWB6 473 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 PLPP6Q8IY26 295 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 RGL4Q8IZJ4 473 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 DRAXINQ8NBI3 349 aaPredicted RBP16.96■□□□□ 0.31
FAM3A-222ENST00000621967 OR10A6Q8NH74 314 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 MUS81Q96NY9 551 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 POLR1BQ9H9Y6 1135 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 KLHL42Q9P2K6 505 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms