RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 ZNF300Q96RE9 604 aaPredicted RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 FBXO10Q9UK96 956 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 TNPO3Q9Y5L0 923 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 FER1L6Q2WGJ9 1857 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 PCMT1P22061 227 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 ITPKAP23677 461 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 DNAJA1P31689 397 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 BMPR1AP36894 532 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 HK3P52790 923 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 NFKB2Q00653 900 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 SMUG1Q53HV7 270 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 CPZQ66K79 652 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 OR8J3Q8NGG0 315 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 MAL2Q969L2 176 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 VPS35Q96QK1 796 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 SLC30A2Q9BRI3 323 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 OR2B2Q9GZK3 357 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 AP5M1Q9H0R1 490 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 TLR8Q9NR97 1041 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 DCAF13Q9NV06 445 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 PRKAB1Q9Y478 270 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 SPEF1Q9Y4P9 236 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 FPGTO14772 594 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 KPNA5O15131 536 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 MUSKO15146 869 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 PCDHGA12O60330 932 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 AP2A2O94973 939 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 SLC25A14O95258 325 aaPredicted RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 ENGP17813 658 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 GNG2P59768 71 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 NKX3-2P78367 333 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 MRPL28Q13084 256 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 MAD2L1Q13257 205 aaPredicted RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 GANABQ14697 944 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 EIF3MQ7L2H7 374 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 ADAMTSL2Q86TH1 951 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 GPR156Q8NFN8 814 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 OTULINQ96BN8 352 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 DIRAS2Q96HU8 199 aa12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 FAM126AQ9BYI3 521 aaPredicted RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
CYFIP1-211ENST00000619348 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 FAM172BPA6NC97 362 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 TRIM64A6NGJ6 449 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 CLIC1O00299 241 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 TNFRSF11BO00300 401 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 PTTG1O95997 202 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 IL6P05231 212 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 CCNYL3P0C7X3 344 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 BCKDHAP12694 445 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 KIR3DL1P43629 444 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 OR1G1P47890 313 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 ZNF280AP59817 542 aaPredicted RBP12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 VLDLRP98155 873 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 SF1Q15637 639 aaKnown RBP12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 RNF175Q8N4F7 328 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 ASB8Q9H765 288 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 FAM105AQ9NUU6 356 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 SLC25A37Q9NYZ2 338 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 GPRC5BQ9NZH0 403 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 UBA2Q9UBT2 640 aaPredicted RBP12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 ST3GAL5Q9UNP4 418 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 KCNH4Q9UQ05 1017 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 GNG14A0A1W2PPG7 69 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 FAM25AB3EWG3 89 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 FAM25CB3EWG5 89 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 FAM25GB3EWG6 89 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 F5H5T6 163 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 SOAT1P35610 550 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 HNF4AP41235 474 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 TUBA1BP68363 451 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 MFSD10Q14728 455 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 LAIR2Q6ISS4 152 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 RFPL4BQ6ZWI9 263 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 TUBA1AQ71U36 451 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 NLGN4XQ8N0W4 816 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 PGBD5Q8N414 524 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 ZNF382Q96SR6 550 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 FEVQ99581 238 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 BRINP2Q9C0B6 783 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 ATG10Q9H0Y0 220 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 KIAA1522Q9P206 1035 aaPredicted RBP12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 RHCGQ9UBD6 479 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 TMEFF2Q9UIK5 374 aaPredicted RBP12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
CYFIP1-211ENST00000619348 E2F3O00716 465 aa12.9□□□□□ -0.34
CYFIP1-211ENST00000619348 HAT1O14929 419 aa12.9□□□□□ -0.34
CYFIP1-211ENST00000619348 SUV39H1O43463 412 aa12.9□□□□□ -0.34
CYFIP1-211ENST00000619348 RHOQP17081 205 aa12.9□□□□□ -0.34
CYFIP1-211ENST00000619348 FPR1P21462 350 aa12.9□□□□□ -0.34
CYFIP1-211ENST00000619348 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms