RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 RIC1Q4ADV7 1423 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 FER1L6Q2WGJ9 1857 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 EIF1AYO14602 144 aaKnown RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 UBBP0CG47 229 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 UBCP0CG48 685 aaKnown RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 HK1P19367 917 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 PAICSP22234 425 aaKnown RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 NNMTP40261 264 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 MAGEB1P43366 347 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 EIF1AXP47813 144 aaKnown RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 TRAPPC3LQ5T215 181 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SLFN13Q68D06 897 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SLC6A19Q695T7 634 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 PET117Q6UWS5 81 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 CUZD1Q86UP6 607 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 TSPYL5Q86VY4 417 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 FOXRED2Q8IWF2 684 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 BCS1LQ9Y276 419 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SIGLEC16A6NMB1 481 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 M0QYV0 167 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 PRKYO43930 277 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 MT-ND1P03886 318 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ITGB6P18564 788 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 HDCP19113 662 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SF3A2Q15428 464 aaKnown RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 PPP1R3AQ16821 1122 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF674Q2M3X9 581 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SMTNL2Q2TAL5 461 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 HIST2H3PS2Q5TEC6 136 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 RNF130Q86XS8 419 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 CDH26Q8IXH8 852 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SLC22A15Q8IZD6 547 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SLC38A6Q8IZM9 456 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 STAG3L4Q8TBR4 150 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 PIGMQ9H3S5 423 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 OSGEPL1Q9H4B0 414 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 KLF15Q9UIH9 416 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 A0A0J9YYE9 177 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 CLCQ05315 142 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SYT16Q17RD7 645 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 GPAT2Q6NUI2 795 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 KCNMB4Q86W47 210 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 LRRC58Q96CX6 371 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 TUBB1Q9H4B7 451 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 AKAP11Q9UKA4 1901 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 RYKP34925 604 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 AVPR1AP37288 418 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 FAM199XQ6PEV8 388 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ANKS3Q6ZW76 656 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 EXOSC8Q96B26 276 aaKnown RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 SERAC1Q96JX3 654 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 FCRL3Q96P31 734 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ASPNQ9BXN1 380 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 DDX60LQ5H9U9 1706 aaKnown RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 AZIN1O14977 448 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 CREBL2O60519 120 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 CXCR4P61073 352 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 GRB10Q13322 594 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 NTRK3Q16288 839 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 UBE2SQ16763 222 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ABLIM2Q6H8Q1 611 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 MARC2Q969Z3 335 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 SPATA5L1Q9BVQ7 753 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 MRM3Q9HC36 420 aaKnown RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 STRCQ7RTU9 1775 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 GLO1Q04760 184 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ASAH1Q13510 395 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 TAF13Q15543 124 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 NLGN2Q8NFZ4 835 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM80Q96HE8 168 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 AGPAT4Q9NRZ5 378 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 FAM118AQ9NWS6 357 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ERVK13-1Q9NX77 482 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 KLQ9UEF7 1012 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 CXorf51AA0A1B0GTR3 108 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 B4GAT1O43505 415 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 PRKAB2O43741 272 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 FGF19O95750 216 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 TP53P04637 393 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 IFNA6P05013 189 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 SLC1A3P43003 542 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 GFOD2Q3B7J2 385 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 UGT3A2Q3SY77 523 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ZDHHC17Q8IUH5 632 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ELF4Q99607 663 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-213ENST00000613099 C14orf105Q9NVL8 296 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 DCLK1O15075 740 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 CNTN5O94779 1100 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 C1QBP02746 253 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 BMP4P12644 408 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 TYRP14679 529 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 CRATP43155 626 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 TPI1P60174 286 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 RAP2BP61225 183 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 KCTD1Q719H9 257 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 LYSMD3Q7Z3D4 306 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 C10orf53Q8N6V4 93 aa4.84□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF471Q9BX82 626 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms