RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FAM72DQ6L9T8 149 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FBXL22Q6P050 247 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 MFSD6Q6ZSS7 791 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 SPATA19Q7Z5L4 167 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 GLRX5Q86SX6 157 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM72BQ86X60 149 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM219AQ8IW50 185 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 LGI2Q8N0V4 545 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 OR8H3Q8N146 312 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 ZNF843Q8N446 348 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 OR4K1Q8NGD4 311 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 OR52N5Q8NH56 324 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 PIGBQ92521 554 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 PROX1Q92786 737 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 ZNF524Q96C55 264 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 SENP5Q96HI0 755 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 HES6Q96HZ4 224 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM71F1Q96KD3 344 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 SPATA33Q96N06 139 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 Q9H8V8 135 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 GRPEL1Q9HAV7 217 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 TRPV4Q9HBA0 871 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FLRT3Q9NZU0 649 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 ZNF624Q9P2J8 865 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 STUB1Q9UNE7 303 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 SCN5AQ14524 2016 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 A0A087WYN8 130 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 HTR3EA5X5Y0 456 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 C2orf81A6NN90 581 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 PMS2P5A8MQ11 134 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 ARPC2O15144 300 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 ATP6AP2O75787 350 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 MOCS3O95396 460 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 GSRP00390 522 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 NGFP01138 241 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 TCF4P15884 667 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 ANOS1P23352 680 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 ITGA3P26006 1051 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 NAGLUP54802 743 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 MAZP56270 477 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 KLC1Q07866 573 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM91A1Q658Y4 838 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 MEX3BQ6ZN04 569 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 NDUFAF2Q8N183 169 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 RASGEF1AQ8N9B8 481 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 CNBD1Q8NA66 436 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 KBTBD8Q8NFY9 601 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 GOT1L1Q8NHS2 421 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 C9orf43Q8TAL5 461 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 KCNE4Q8WWG9 221 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 NSMAFQ92636 917 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 SIX2Q9NPC8 291 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 GSN-AS1Q9NRJ2 163 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM207AQ9NSI2 230 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 GTF3C4Q9UKN8 822 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 KCNJ14Q9UNX9 436 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 TCF19Q9Y242 345 aa3.89□□□□□ -1.79
SMCHD1-213ENST00000609587 TRAV24A0A0B4J272 114 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 A0A1W2PPW3 197 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 CASTOR2A6NHX0 329 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 ZNF197O14709 1029 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 PCDH7O60245 1069 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 SNX3O60493 162 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 LUC7L3O95232 432 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 EDN1P05305 212 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM58BPP0C7Q3 252 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 IGHV4-31P0DP07 118 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 ERVK-10P10266 1014 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 ADRA2CP18825 462 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 TLX1P31314 330 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 CSTF2P33240 577 aaKnown RBP eCLIP3.88□□□□□ -1.791e-21■■■■■ 58
SMCHD1-213ENST00000609587 RPL21P46778 160 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 MTCP1P56278 107 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 GSDMDP57764 484 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 HILS1P60008 231 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 HERV-K104P61576 105 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 SCN1BQ07699 218 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 P2RY6Q15077 328 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 ALDH1L2Q3SY69 923 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 LRRC73Q5JTD7 316 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 MPP7Q5T2T1 576 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 C20orf194Q5TEA3 1177 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 SHEQ5VZ18 495 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 SH2D5Q6ZV89 423 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 SLC16A9Q7RTY1 509 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 OR10Q1Q8NGQ4 319 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 GRAPLQ8TC17 118 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 TSPAN18Q96SJ8 248 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 INTS14Q96SY0 518 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 INPP5KQ9BT40 448 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 OR2B2Q9GZK3 357 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 ZMYND12Q9H0C1 365 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 TLE6Q9H808 572 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 SLC52A3Q9NQ40 469 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 P4HTMQ9NXG6 502 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 C2CD2Q9Y426 696 aa3.88□□□□□ -1.79
SMCHD1-213ENST00000609587 GREB1LQ9C091 1923 aaPredicted RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 IGHV4-61A0A0C4DH41 118 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM86B1E9PN63 330 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms