RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TPK1Q9H3S4 243 aa21.79■■□□□ 1.08
SHANK2-220ENST00000608988 REEP1Q9H902 201 aa21.79■■□□□ 1.08
SHANK2-220ENST00000608988 SLC6A13Q9NSD5 602 aa21.79■■□□□ 1.08
SHANK2-220ENST00000608988 MKLN1Q9UL63 735 aa21.79■■□□□ 1.08
SHANK2-220ENST00000608988 A0A0D9SEW6 157 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 MYO1GB0I1T2 1018 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 TMEM189-UBE2V1I3L0A0 370 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 KCNK2O95069 426 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 MED26O95402 600 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 TBX18O95935 607 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 LCKP06239 509 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 MYCLP1P12525 358 aaPredicted RBP21.78■■□□□ 1.08
SHANK2-220ENST00000608988 EPB42P16452 691 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 IL1RL1Q01638 556 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 MAP2K5Q13163 448 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 SLC13A2Q13183 592 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 COLEC12Q5KU26 742 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 MORN1Q5T089 497 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 TPRG1LQ5T0D9 272 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 EIF3MQ7L2H7 374 aaKnown RBP21.78■■□□□ 1.08
SHANK2-220ENST00000608988 OR7D4Q8NG98 312 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 ATL1Q8WXF7 558 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 HTRA1Q92743 480 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 NELL1Q92832 810 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 BARD1Q99728 777 aaKnown RBP21.78■■□□□ 1.08
SHANK2-220ENST00000608988 EGFL8Q99944 293 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 SPATA9Q9BWV2 254 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 AASDHPPTQ9NRN7 309 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 SLCO3A1Q9UIG8 710 aa21.78■■□□□ 1.08
SHANK2-220ENST00000608988 SAMHD1Q9Y3Z3 626 aaKnown RBP21.78■■□□□ 1.08
SHANK2-220ENST00000608988 FFAR3O14843 346 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 GPR42O15529 346 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 TBX1O43435 398 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 C9P02748 559 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 RPLP0P05388 317 aaKnown RBP21.77■■□□□ 1.08
SHANK2-220ENST00000608988 HMBSP08397 361 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 GPR15P49685 360 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 RPP38P78345 283 aaKnown RBP21.77■■□□□ 1.08
SHANK2-220ENST00000608988 LYPLAL1Q5VWZ2 237 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 AHSA2Q719I0 299 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 SLC46A3Q7Z3Q1 461 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 P3H2Q8IVL5 708 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 PYCR2Q96C36 320 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 MYEOVQ96EZ4 313 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 COPS4Q9BT78 406 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 FKBP14Q9NWM8 211 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 VPS51Q9UID3 782 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 PSORS1C1Q9UIG5 152 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 LOC110117498-PIK3R3F6TDL0 507 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 SMN1Q16637 294 aaKnown RBP21.77■■□□□ 1.08
SHANK2-220ENST00000608988 VMACQ2NL98 169 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 USP50Q70EL3 339 aaPredicted RBP21.77■■□□□ 1.08
SHANK2-220ENST00000608988 CBLL1Q75N03 491 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 SLC7A5P1Q8MH63 180 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 RBFAQ8N0V3 343 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 EFHBQ8N7U6 833 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 ATG16L2Q8NAA4 619 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 PIK3R3Q92569 461 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 CDK5RAP1Q96SZ6 601 aaKnown RBP21.77■■□□□ 1.08
SHANK2-220ENST00000608988 RAD9AQ99638 391 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 RMI1Q9H9A7 625 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 IL17CQ9P0M4 197 aa21.77■■□□□ 1.08
SHANK2-220ENST00000608988 CLDN9O95484 217 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 APOA1P02647 267 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 LIPAP38571 399 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 SF3B4Q15427 424 aaKnown RBP eCLIP21.76■■□□□ 1.07
SHANK2-220ENST00000608988 GGTA1PQ4G0N0 100 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 INO80DQ53TQ3 878 aaPredicted RBP21.76■■□□□ 1.07
SHANK2-220ENST00000608988 DOK6Q6PKX4 331 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 SERINC5Q86VE9 423 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 APH1BQ8WW43 257 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 CMTM7Q96FZ5 175 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 SPON2Q9BUD6 331 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.76■■□□□ 1.072e-6■■■■□ 20.6
SHANK2-220ENST00000608988 FARSBQ9NSD9 589 aaKnown RBP21.76■■□□□ 1.07
SHANK2-220ENST00000608988 PNMA8BQ9ULN7 279 aaPredicted RBP21.76■■□□□ 1.07
SHANK2-220ENST00000608988 PADI3Q9ULW8 664 aa21.76■■□□□ 1.07
SHANK2-220ENST00000608988 SERTM1A2A2V5 107 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 IQCF5A8MTL0 148 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 RFXANKO14593 260 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 PCDHGA12O60330 932 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 ACSL4O60488 711 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 PRMT3O60678 531 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CLDN11O75508 207 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CTSHP09668 335 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 KDELR2P33947 212 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 OLR1P78380 273 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 TIGD6Q17RP2 521 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CCDC71Q8IV32 467 aaPredicted RBP21.75■■□□□ 1.07
SHANK2-220ENST00000608988 ZZZ3Q8IYH5 903 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 ENTHD1Q8IYW4 607 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 C10orf111Q8N326 155 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 BRI3BPQ8WY22 251 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 INPP5KQ9BT40 448 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 OR2B2Q9GZK3 357 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 SIAEQ9HAT2 523 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 ZBTB20Q9HC78 741 aaPredicted RBP21.75■■□□□ 1.07
SHANK2-220ENST00000608988 TRPM7Q96QT4 1865 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 FAM172BPA6NC97 362 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 LOC730098B7Z3J9 87 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms