RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TMEM165Q9HC07 324 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 DPP3Q9NY33 737 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NPAP1Q9NZP6 1156 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 DUSP12Q9UNI6 340 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 OR2W1Q9Y3N9 320 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 UHRF1BP1LA0JNW5 1464 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TRAV6A0A075B6T7 132 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 HNRNPCL2B2RXH8 293 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SNAP23O00161 211 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 STX6O43752 255 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 REC8O95072 547 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CD59P13987 128 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CPT2P23786 658 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PBLDP30039 288 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 RFC4P35249 363 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 LHX1P48742 406 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 GMPSP49915 693 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 GAS1P54826 345 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NUCB2P80303 420 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CUL3Q13618 768 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NPTX1Q15818 432 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 UGT3A2Q3SY77 523 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 IGSF11Q5DX21 431 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NEPROQ6NW34 567 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 KLC3Q6P597 504 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CENPVQ7Z7K6 275 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC148Q8NFR7 591 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 WDR20Q8TBZ3 569 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ROBO4Q8WZ75 1007 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 MED30Q96HR3 178 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 RADILQ96JH8 1075 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 LMLNQ96KR4 655 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PRMT6Q96LA8 375 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 LINC00615Q96LM1 132 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 C3orf30Q96M34 536 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 FAM20AQ96MK3 541 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PCYT2Q99447 389 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 DDOQ99489 341 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 GPATCH1Q9BRR8 931 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PCDHGA5Q9Y5G8 931 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SYNJ2BP-COX16A0A087WUM0 186 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 A0A0G2JPF8 293 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 HNRNPCL3B7ZW38 293 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM189-UBE2V1I3L0A0 370 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 BMPR1BO00238 502 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SLC22A2O15244 555 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NVLO15381 856 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ATP5BP06576 529 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ZFYP08048 801 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ACAA1P09110 424 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 HNRNPCL4P0DMR1 293 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 T-ENOLP0DO92 83 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TNFRSF8P28908 595 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 EPHA2P29317 976 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 RPL9P32969 192 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 GP5P40197 560 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CDKN2AP42771 156 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CLCN4P51793 760 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PLTPP55058 493 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TUBB4BP68371 445 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 RALGDSQ12967 914 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 MRPL28Q13084 256 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SRSF9Q13242 221 aaKnown RBP eCLIP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 UBE2V1Q13404 147 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 RFTN1Q14699 578 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 XKR6Q5GH73 641 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF772Q68DY9 489 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PRSS57Q6UWY2 283 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 GPR141Q7Z602 305 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC65Q8IXS2 484 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 KIF18AQ8NI77 898 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SLC38A5Q8WUX1 472 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC107Q8WV48 283 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SLC44A1Q8WWI5 657 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 MOB3AQ96BX8 217 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SLC47A1Q96FL8 570 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 COG3Q96JB2 828 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CMKLR1Q99788 373 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NACAP1Q9BZK3 213 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 KLHL4Q9C0H6 718 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 MMADHCQ9H3L0 296 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 UCK1Q9HA47 277 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ABCF3Q9NUQ8 709 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TAS2R14Q9NYV8 317 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 FBXL5Q9UKA1 691 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SNX7Q9UNH6 387 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CPDO75976 1380 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NISCHQ9Y2I1 1504 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 DENND3A2RUS2 1198 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 TSPY2A6NKD2 308 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 PRAC2D3DTV9 90 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 E9PI62 339 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 SPRY1O43609 319 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-212ENST00000557538 SNX4O95219 450 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 TRIM16O95361 564 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 STAMBPO95630 424 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 APOA4P06727 396 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 LIFP15018 202 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 JAK1P23458 1154 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 TKTP29401 623 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms