RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PCDHGB6Q9Y5F9 930 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 MTCL1Q9Y4B5 1905 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PLXNB3Q9ULL4 1909 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 A0A1B0GTQ1 180 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ILVBLA1L0T0 632 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 HMX3A6NHT5 357 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 LDLRAD4O15165 306 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 DCXO43602 365 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 NDUFS2O75306 463 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TBX10O75333 385 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 H2AFYO75367 372 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 F11P03951 625 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 NR2C1P13056 603 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF12P17014 697 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ITGB6P18564 788 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 NR4A1P22736 598 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 EPHA3P29320 983 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 PKLRP30613 574 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SERPINB5P36952 375 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ALDH7A1P49419 539 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ACTR1AP61163 376 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ARF5P84085 180 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SLC25A3Q00325 362 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ECT2LQ008S8 904 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 DSG1Q02413 1049 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 BTKQ06187 659 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SNTA1Q13424 505 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SCARB2Q14108 478 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 CSHL1Q14406 222 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 RALGPS1Q5JS13 557 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TMEM31Q5JXX7 168 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 HECTD2Q5U5R9 776 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ARSKQ6UWY0 536 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 RPS27LQ71UM5 84 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 RNASE11Q8TAA1 199 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 NRG4Q8WWG1 115 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 GAB3Q8WWW8 586 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 OVCA2Q8WZ82 227 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF689Q96CS4 500 aaPredicted RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TMA16Q96EY4 203 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF512Q96ME7 567 aaPredicted RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF599Q96NL3 588 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 WDR12Q9GZL7 423 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MCOLN1Q9GZU1 580 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MAGEH1Q9H213 219 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MVB12BQ9H7P6 319 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SYTL2Q9HCH5 934 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 RASSF1Q9NS23 344 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 KLHL9Q9P2J3 617 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MLXQ9UH92 298 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 AGO1Q9UL18 857 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 PRRC2BQ5JSZ5 2229 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 A0A087X1B8 175 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 A0A1W2PPL8 197 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 NRG2O14511 850 aaPredicted RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 DOK2O60496 412 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TRIM3O75382 744 aaPredicted RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TRIM16O95361 564 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 GOT2P00505 430 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 EPOP01588 193 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TP53P04637 393 aaPredicted RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 FGF1P05230 155 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 IFI30P13284 250 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ARSAP15289 507 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 CD46P15529 392 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 HLA-DPA1P20036 260 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ITGB8P26012 769 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 CORO1AP31146 461 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 GRK3P35626 688 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 PGM1P36871 562 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 RPL14P50914 215 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 CLCN5P51795 746 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 CDH4P55283 916 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 PRMT2P55345 433 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SQSTM1Q13501 440 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TRIM60Q495X7 471 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 THEM4Q5T1C6 240 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 GARNL3Q5VVW2 1013 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 FOXB2Q5VYV0 432 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 CYHR1Q6ZMK1 362 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TRIM69Q86WT6 500 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TIGD4Q8IY51 512 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MDGA1Q8NFP4 955 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 RSC1A1Q92681 617 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 HTRA1Q92743 480 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MYDGFQ969H8 173 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MCUR1Q96AQ8 359 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 PTERQ96BW5 349 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 DGCR14Q96DF8 476 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SGF29Q96ES7 293 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SSX3Q99909 188 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 MRPL57Q9BQC6 102 aaKnown RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 EDEM2Q9BV94 578 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 ILKAPQ9H0C8 392 aaPredicted RBP4.97□□□□□ -1.61
TMEM260-210ENST00000556422 SUV39H2Q9H5I1 410 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 DCLRE1BQ9H816 532 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TRPV4Q9HBA0 871 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 NUP50Q9UKX7 468 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 TBX21Q9UL17 535 aa4.97□□□□□ -1.61
TMEM260-210ENST00000556422 INVSQ9Y283 1065 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms