RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TAX1BP1Q86VP1 789 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 LSMEM2Q8N112 164 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 CARFQ8N187 725 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 RHEBL1Q8TAI7 183 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 RDH11Q8TC12 318 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 DYDC1Q8WWB3 177 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 DLG3Q92796 817 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 SLC22A18Q96BI1 424 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 CCDC74BQ96LY2 380 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 TGM7Q96PF1 710 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 GATA5Q9BWX5 397 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-218ENST00000555213 IQCGQ9H095 443 aaKnown RBP10.56□□□□□ -0.72
SHMT2-218ENST00000555213 MRPL46Q9H2W6 279 aaKnown RBP10.56□□□□□ -0.72
SHMT2-218ENST00000555213 XKR8Q9H6D3 395 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 ALG9Q9H6U8 611 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 PARVBQ9HBI1 364 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 ACSS2Q9NR19 701 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 XPR1Q9UBH6 696 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 EPHA6Q9UF33 1036 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 PLAGL1Q9UM63 463 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 LAMA1P25391 3075 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 PIPSLA2A3N6 862 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 NPEPPSL1A6NEC2 478 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 TLCD2A6NGC4 264 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 GFYI3L273 518 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 HGSO14964 777 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 TOX3O15405 576 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 HYAL3O43820 417 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 KLK8O60259 260 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 TRIM13O60858 407 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 FAM107AO95990 144 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 CHRM5P08912 532 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 RBP1P09455 135 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ARL4DP49703 201 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 KPNA2P52292 529 aaKnown RBP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 DNAJB13P59910 316 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 OCRLQ01968 901 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 TARDBPQ13148 414 aaKnown RBP eCLIP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 KIR2DS3Q14952 304 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 SNAP47Q5SQN1 464 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ZCCHC23Q6ZST2 131 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 PRSS42Q7Z5A4 293 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 SLITRK4Q8IW52 837 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 OR9A1PQ8NGU1 263 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 OR2L8Q8NGY9 312 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ZNF473Q8WTR7 871 aaKnown RBP10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ATL1Q8WXF7 558 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 SCYL1Q96KG9 808 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 SORT1Q99523 831 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 CMKLR1Q99788 373 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 SLC12A9Q9BXP2 914 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 FGFR1OP2Q9NVK5 253 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ARL15Q9NXU5 204 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ACTR10Q9NZ32 417 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 KLHL3Q9UH77 587 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ADAMTS6Q9UKP5 1117 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 POMT2Q9UKY4 750 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 NEUROG3Q9Y4Z2 214 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 ZFHX4Q86UP3 3567 aa10.55□□□□□ -0.72
SHMT2-218ENST00000555213 CCDC187A0A096LP49 1063 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 IGHV5-10-1A0A0J9YXX1 117 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 CCDC189A1A4V9 331 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 FAM149AA5PLN7 773 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 ISM1B1AKI9 464 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 BTN3A3O00478 584 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 LYPLA1O75608 230 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 C9P02748 559 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 S100BP04271 92 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 VIMP08670 466 aaKnown RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 ANKRD34CP0C6C1 535 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 MYL2P10916 166 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 POLR2CP19387 275 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 ATP5F1P24539 256 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 MPSTP25325 297 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 CSTF2P33240 577 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 CCR10P46092 362 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 PDX1P52945 283 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 PNLIPRP1P54315 467 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 PRKAA2P54646 552 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 GFERP55789 205 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 CLDN6P56747 220 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 ZFP36L1Q07352 338 aaKnown RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 STX3Q13277 289 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 NAA25Q14CX7 972 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 TSNQ15631 228 aaKnown RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 ZXDCQ2QGD7 858 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-218ENST00000555213 CYB5D1Q6P9G0 228 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 SBSNQ6UWP8 590 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 FAM92BQ6ZTR7 304 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 B3GNT8Q7Z7M8 397 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 SYTL1Q8IYJ3 562 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 AGBL5Q8NDL9 886 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 HMGCLL1Q8TB92 370 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 RAB3IL1Q8TBN0 382 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 BCAS4Q8TDM0 211 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 LRRC8CQ8TDW0 803 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 SMPDL3AQ92484 453 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 NXPE2Q96DL1 559 aa10.54□□□□□ -0.72
SHMT2-218ENST00000555213 LIN37Q96GY3 246 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms