RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 FOXD3Q9UJU5 478 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ATXN7L1Q9ULK2 861 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SNX12Q9UMY4 172 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PCDHA4Q9UN74 947 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PTPN22Q9Y2R2 807 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CSADQ9Y600 493 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DNMT3AQ9Y6K1 912 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PHLPP1O60346 1717 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CROCC2H7BZ55 1655 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 COL16A1Q07092 1604 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 USP47Q96K76 1375 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SPATA31A6Q5VVP1 1343 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 A0A1W2PRV1 198 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 C9orf170A2RU37 121 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 AGAP5A6NIR3 686 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 HACD1B0YJ81 288 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 KDM4EB2RXH2 506 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 NR5A2O00482 541 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MAGEB2O15479 319 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 BUD23O43709 281 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PQBP1O60828 265 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DNAJB6O75190 326 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 WBP4O75554 376 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 JUNP05412 331 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 APRTP07741 180 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MMP3P08254 477 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 STAG3L2P0CL84 134 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CTPS1P17812 591 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ERCC2P18074 760 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 AMPD1P23109 780 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ADRA1DP25100 572 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 OTX1P32242 354 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MPIP34949 423 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 IRS1P35568 1242 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TGFBR2P37173 567 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 IL9RQ01113 521 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SOX4Q06945 474 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 FGL1Q08830 312 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SCGB2A2Q13296 93 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 IL18R1Q13478 541 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 NAE1Q13564 534 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 HEPACAMQ14CZ8 416 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PSMD5Q16401 504 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUOXA2Q1HG44 320 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TWISTNBQ3B726 338 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GLRA4Q5JXX5 417 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CLLU1Q5K131 121 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ATAD3CQ5T2N8 411 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 LRIF1Q5T3J3 769 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PIP5KL1Q5T9C9 394 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 LCN1P1Q5VSP4 162 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 LRRC38Q5VT99 294 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DESI1Q6ICB0 168 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 FBXO42Q6P3S6 717 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PEG10Q86TG7 708 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ISCA2Q86U28 154 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PLD3Q8IV08 490 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DDIASQ8IXT1 998 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PHACTR4Q8IZ21 702 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 RASGEF1CQ8N431 466 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 COMMD1Q8N668 190 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MB21D1Q8N884 522 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 Q8N9G6 341 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 POGLUT1Q8NBL1 392 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TMEM145Q8NBT3 493 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CCDC54Q8NEL0 328 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 KBTBD8Q8NFY9 601 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 BPIFB1Q8TDL5 484 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CKAP2Q8WWK9 683 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PPP1R14AQ96A00 147 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SH3YL1Q96HL8 342 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PRMT1Q99873 361 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TTYH2Q9BSA4 534 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SLC2A11Q9BYW1 496 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SEMA4CQ9C0C4 833 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SOHLH2Q9NX45 425 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TEX10Q9NXF1 929 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SMPD3Q9NY59 655 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ADAM30Q9UKF2 790 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 STARD10Q9Y365 291 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ATP7BP35670 1465 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ADGRA2Q96PE1 1338 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 A0A0G2JLW4 131 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 A0A1W2PPC1 479 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 SAC3D1A6NKF1 404 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 TRDCB7Z8K6 153 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 TMEM238C9JI98 176 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 RGS10O43665 173 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 ERAL1O75616 437 aaKnown RBP5.02□□□□□ -1.61
UBE4A-203ENST00000545354 UGT2B17O75795 530 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 KRT33AO76009 404 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 NTSR2O95665 410 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 TP53P04637 393 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-203ENST00000545354 ADH1AP07327 375 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 SPARCP09486 303 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 NR2C1P13056 603 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 F3P13726 295 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 ATF2P15336 505 aa5.02□□□□□ -1.61
UBE4A-203ENST00000545354 CD1EP15812 388 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms