RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 DRC7Q8IY82 874 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 SYCP3Q8IZU3 236 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 PGBD5Q8N414 524 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 SYT14Q8NB59 555 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 FBF1Q8TES7 1133 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 GATAD1Q8WUU5 269 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 NTAN1Q96AB6 310 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 ANKRD9Q96BM1 317 aaPredicted RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 ZNF837Q96EG3 531 aaPredicted RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 EPSTI1Q96J88 318 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 SCYL1Q96KG9 808 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 AK8Q96MA6 479 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 COL21A1Q96P44 957 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 OR2A14Q96R47 310 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 NCAPGQ9BPX3 1015 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 UTP23Q9BRU9 249 aaKnown RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 TUBB6Q9BUF5 446 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 TRAF4Q9BUZ4 470 aaPredicted RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 C1QTNF5Q9BXJ0 243 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 RAB34Q9BZG1 259 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 ATG10Q9H0Y0 220 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 THAP9Q9H5L6 903 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 LRRC19Q9H756 370 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 KIR3DX1Q9H7L2 352 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 UPF2Q9HAU5 1272 aaKnown RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 TRIM39Q9HCM9 518 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 MMP25Q9NPA2 562 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 ASNSD1Q9NWL6 643 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 AURKAIP1Q9NWT8 199 aaPredicted RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 DDIT4Q9NX09 232 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 MTRF1LQ9UGC7 380 aaKnown RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 SLC12A6Q9UHW9 1150 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 DNAI1Q9UI46 699 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 TMEFF2Q9UIK5 374 aaPredicted RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 C3orf18Q9UK00 162 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 RCAN3Q9UKA8 241 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 NXT1Q9UKK6 140 aaKnown RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 KIAA1257Q9ULG3 409 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 KCNS2Q9ULS6 477 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 PCDHB10Q9UN67 800 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 CNTN6Q9UQ52 1028 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 LIPT1Q9Y234 373 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 EIF3LQ9Y262 564 aaKnown RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 B3GALT5Q9Y2C3 310 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 MMP24Q9Y5R2 645 aa2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 TET2Q6N021 2002 aaPredicted RBP2.15□□□□□ -2.07
RNU1-48P-201ENST00000516400 IGHV3-20A0A0C4DH32 117 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 IGHV4-61A0A0C4DH41 118 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 A0A0G2JMM0 328 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 A0A1W2PPB8 328 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 A0A1W2PRS3 328 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 HYKKA2RU49 373 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 PABPN1LA6NDY0 278 aaKnown RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 CD8B2A6NJW9 211 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 A8MUI8 341 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 ARHGEF33A8MVX0 844 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 KIR3DP1A8MWS1 328 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 GPR89AB7ZAQ6 455 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 GOLGA8MH3BSY2 632 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 TRIM77I1YAP6 450 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 TFECO14948 347 aaPredicted RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 FRS3O43559 492 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 CDC40O60508 579 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 SRGAP2O75044 1071 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 TBCAO75347 108 aaKnown RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 ITGA10O75578 1167 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 TSPAN15O95858 294 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 CGAP01215 116 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 FSHBP01225 129 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 ESR1P03372 595 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 GPR89BP0CG08 455 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 GABRA1P14867 456 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 SLC25A16P16260 332 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 RHOQP17081 205 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 MDKP21741 143 aaPredicted RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 CDH3P22223 829 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 USF1P22415 310 aaPredicted RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 CTSSP25774 331 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 IL2RGP31785 369 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 HTR7P34969 479 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 PCK1P35558 622 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 SLC6A12P48065 614 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 MAPKAPK2P49137 400 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 PPM1FP49593 454 aaPredicted RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 GZMKP49863 264 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 HLCSP50747 726 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 CYP2J2P51589 502 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 ITGA8P53708 1063 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 MLF1P58340 268 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 RHOAP61586 193 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 RPS4XP62701 263 aaKnown RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 POLR2LP62875 67 aaKnown RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 UBA52P62987 128 aaKnown RBP2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 KRT85P78386 507 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 GUCY1B3Q02153 619 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 ENPEPQ07075 957 aa2.14□□□□□ -2.07
RNU1-48P-201ENST00000516400 TRAF2Q12933 501 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms