RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PRR23AA6NEV1 266 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 C2orf81A6NN90 581 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM58BPP0C7Q3 252 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 CFC1P0CG37 223 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 TLX1P31314 330 aaPredicted RBP4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 CDKN1AP38936 164 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 VAMP7P51809 220 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 CAPZA1P52907 286 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 TUBB4BP68371 445 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 SCARB2Q14108 478 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 TAF13Q15543 124 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 PTGISQ16647 500 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 CTU2Q2VPK5 515 aaKnown RBP4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 SPATA19Q7Z5L4 167 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 RASGEF1AQ8N9B8 481 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 SETD6Q8TBK2 473 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 HPSE2Q8WWQ2 592 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 NSMAFQ92636 917 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 SPAG5Q96R06 1193 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 F2RL3Q96RI0 385 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 PIGQQ9BRB3 760 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 PRRG4Q9BZD6 226 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 TRPV4Q9HBA0 871 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 ZNF71Q9NQZ8 489 aaPredicted RBP4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM207AQ9NSI2 230 aaPredicted RBP4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 MRGBPQ9NV56 204 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 C2CD2Q9Y426 696 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 POMT1Q9Y6A1 747 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 STK36Q9NRP7 1315 aa4.61□□□□□ -1.67
HMGCS1-207ENST00000514610 TRAV24A0A0B4J272 114 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 A0A0G2JLW4 131 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 ARHGEF37A1IGU5 675 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 CCL24O00175 119 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 PCDH7O60245 1069 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 EIF5BO60841 1220 aaKnown RBP4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 CLPTM1O96005 669 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 ZFYP08048 801 aaPredicted RBP4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 DARSP14868 501 aaKnown RBP4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 PSMA3P25788 255 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 MAP2K2P36507 400 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 WNT5AP41221 380 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 ALDH3A2P51648 485 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 BMXP51813 675 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 MTCP1P56278 107 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 PTENP60484 403 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 RBP5P82980 135 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 RASGEF1BQ0VAM2 473 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 PHKG1Q16816 387 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 GTDC1Q4AE62 458 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 HECTD3Q5T447 861 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 ENPP7Q6UWV6 458 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 C11orf57Q6ZUT1 292 aaPredicted RBP4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 CNBD1Q8NA66 436 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 OR2T11Q8NH01 316 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 GRAPLQ8TC17 118 aaPredicted RBP4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 KCNE4Q8WWG9 221 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 ST6GALNAC6Q969X2 333 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 HES6Q96HZ4 224 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 SPATA17Q96L03 361 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 ADPGKQ9BRR6 497 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 GTPBP2Q9BX10 602 aaKnown RBP4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 CPVLQ9H3G5 476 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 GSN-AS1Q9NRJ2 163 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 TXNDC16Q9P2K2 825 aa4.6□□□□□ -1.67
HMGCS1-207ENST00000514610 GRID2O43424 1007 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 TRMUO75648 421 aaKnown RBP4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 DFFBO76075 338 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 SIX3O95343 332 aaPredicted RBP4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 EDN1P05305 212 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM157CP0CG43 387 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 HOXC13P31276 330 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 RPL21P46778 160 aaKnown RBP4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 GLIPR1P48060 266 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 NAGLUP54802 743 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 GNB1P62873 340 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 IRX6P78412 446 aaPredicted RBP4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 CDR2Q01850 454 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 TUBB2AQ13885 445 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 NONOQ15233 471 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 TAZQ16635 292 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 UGCGQ16739 394 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 ARHGEF16Q5VV41 709 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM91A1Q658Y4 838 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 OR4A47Q6IF82 309 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 TMEM182Q6ZP80 229 aaPredicted RBP4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 KLHDC1Q8N7A1 406 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 C9orf43Q8TAL5 461 aaPredicted RBP4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 DEPDC1BQ8WUY9 529 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 HEXDCQ8WVB3 486 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 MR1Q95460 341 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 FERMT1Q9BQL6 677 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 FSD1Q9BTV5 496 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 TUBB2BQ9BVA1 445 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 ZNF696Q9H7X3 374 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 CNTNAP2Q9UHC6 1331 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 SNX7Q9UNH6 387 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 TNNQ9UQP3 1299 aa4.59□□□□□ -1.67
HMGCS1-207ENST00000514610 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms