RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ADIPOR2Q86V24 386 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 COMMD2Q86X83 199 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 LYG1Q8N1E2 194 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 ARHGAP24Q8N264 748 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 FBXO39Q8N4B4 442 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 OR5AP2Q8NGF4 316 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 ZNRF4Q8WWF5 429 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 MAK16Q9BXY0 300 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 ZNF215Q9UL58 517 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 WBP11Q9Y2W2 641 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 CHD4Q14839 1912 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 DUOX2Q9NRD8 1548 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 ADGRL2O95490 1459 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 FEZF1A0PJY2 475 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 DUS4LO95620 317 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 TRIM21P19474 475 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 TPD52P55327 224 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 PHLDA2Q53GA4 152 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 KBTBD6Q86V97 674 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 LACC1Q8IV20 430 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 TMEM139Q8IV31 216 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 RAB42Q8N4Z0 105 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 FAM222BQ8WU58 562 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 SKA1Q96BD8 255 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 PKP2Q99959 881 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 TREX2Q9BQ50 279 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 DCTN5Q9BTE1 182 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 FUCA2Q9BTY2 467 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 CLEC7AQ9BXN2 247 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 ZHX3Q9H4I2 956 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 NRAPQ86VF7 1730 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 KIF15Q9NS87 1388 aa4.51□□□□□ -1.69
TOPBP1-206ENST00000508524 PTPN23Q9H3S7 1636 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 PCNX3Q9H6A9 2034 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 ANKUB1A6NFN9 424 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 E9PQ18 207 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 ADAMDEC1O15204 470 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 AVILO75366 819 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 DFFBO76075 338 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 CLDN1O95832 211 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 IGHV4-31P0DP07 118 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 SNAI3Q3KNW1 292 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 ITPRIPL2Q3MIP1 535 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 TRIM65Q6PJ69 517 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 CFAP206Q8IYR0 622 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 NPEPL1Q8NDH3 523 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 PHLDA1Q8WV24 401 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 CDRT15Q96T59 188 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 OLFM1Q99784 485 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 KIFC3Q9BVG8 833 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 NUP85Q9BW27 656 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 MMP27Q9H306 513 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 FGF21Q9NSA1 209 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 PSD3Q9NYI0 1048 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 ERAP1Q9NZ08 941 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 B3GAT1Q9P2W7 334 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 EPHA6Q9UF33 1036 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 NME7Q9Y5B8 376 aa4.5□□□□□ -1.69
TOPBP1-206ENST00000508524 ABCA3Q99758 1704 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 ADGRB2O60241 1585 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 ERBINQ96RT1 1412 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 A6NCN8 305 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 TSPY4P0CV99 314 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 TSPY10P0CW01 314 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 HOXD13P35453 343 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 KRT2P35908 639 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 PRELPP51888 382 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 SGSM1Q2NKQ1 1148 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 TCTE1Q5JU00 501 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 SPDYCQ5MJ68 293 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 KIRREL3Q8IZU9 778 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 POC5Q8NA72 575 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 PTPMT1Q8WUK0 201 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 AZIN2Q96A70 460 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 AGAP3Q96P47 875 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 NAP1L4Q99733 375 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 PITPNM3Q9BZ71 974 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 OSGEPL1Q9H4B0 414 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 TBC1D17Q9HA65 648 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 CACNG4Q9UBN1 327 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 LRWD1Q9UFC0 647 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 DAPK2Q9UIK4 370 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 WDR37Q9Y2I8 494 aa4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 PTRH2Q9Y3E5 179 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 LAS1LQ9Y4W2 734 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-206ENST00000508524 LOC102723996A0A087X1L8 192 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 TMEM221A6NGB7 291 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 GJB3O75712 270 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 OR2T7P0C7T2 308 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 GCH1P30793 250 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 NRIP1P48552 1158 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 IRX6P78412 446 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 XKR3Q5GH77 459 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 SLC25A53Q5H9E4 307 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 DOK6Q6PKX4 331 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 OR52N5Q8NH56 324 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 TIGD1Q96MW7 591 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 GHITMQ9H3K2 345 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 BLOC1S4Q9NUP1 217 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 GRID1Q9ULK0 1009 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms