RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CCDC83Q8IWF9 413 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 APCDD1Q8J025 514 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 MUC20Q8N307 709 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 RTL3Q8N8U3 475 aaKnown RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 AMER3Q8N944 861 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 KCNH5Q8NCM2 988 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 OR4K1Q8NGD4 311 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 ST7LQ8TDW4 575 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 PHF21BQ96EK2 531 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 FAM71F1Q96KD3 344 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 TMEM237Q96Q45 408 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 Q9H8V8 135 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 SPG21Q9NZD8 308 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 APPL1Q9UKG1 709 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 RALYQ9UKM9 306 aaKnown RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 FBXW2Q9UKT8 454 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 GPR132Q9UNW8 380 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 PA2G4Q9UQ80 394 aaKnown RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 ADCY10Q96PN6 1610 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 SPAG9O60271 1321 aaKnown RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 CGNL1Q0VF96 1302 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 CTAGE9A4FU28 777 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 MAGEA13PA6NCF6 341 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 DNAJC9-AS1A6NH13 148 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 SRRM3A6NNA2 597 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 HNRNPCL2B2RXH8 293 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 PPFIA2O75334 1257 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 GLCEO94923 617 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 CTAGE8P0CG41 777 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 FCGR1AP12314 374 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 CDH1P12830 882 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 CCKBRP32239 447 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 NPBWR1P48145 328 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 THOP1P52888 689 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 PDX1P52945 283 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 CYP4A22Q5TCH4 519 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 ZNF425Q6IV72 752 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 PIWIL4Q7Z3Z4 852 aaKnown RBP4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 RABEPKQ7Z6M1 372 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 SFR1Q86XK3 245 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 CTAGE4Q8IX94 777 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 PELI3Q8N2H9 469 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 P2RX5Q93086 422 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 GAL3ST4Q96RP7 486 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 NTPCRQ9BSD7 190 aaKnown RBP4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 TRAF4Q9BUZ4 470 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 SEZ6LQ9BYH1 1024 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 OSBPL8Q9BZF1 889 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 TM6SF1Q9BZW5 370 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 MIS12Q9H081 205 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 TNMDQ9H2S6 317 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 GAREM1Q9H706 876 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 AKIRIN1Q9H9L7 192 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 COMMD8Q9NX08 183 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 SPHK1Q9NYA1 384 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 DAPK2Q9UIK4 370 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 POU2F3Q9UKI9 436 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 ITM2BQ9Y287 266 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 TRIM17Q9Y577 477 aa4.96□□□□□ -1.62
HMGB1P3-201ENST00000502802 A0A0A6YYC8 382 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 ILVBLA1L0T0 632 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 CD8B2A6NJW9 211 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 C4orf47A7E2U8 309 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 I3L1I5 382 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 INO80B-WBP1J3KQ70 363 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 PLOD2O00469 737 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 VEGFDO43915 354 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 SNX3O60493 162 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 SEC22BO75396 215 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 RAD51DO75771 328 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 SERPINB6P35237 376 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 SLC12A3P55017 1021 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 NANOS3P60323 173 aaKnown RBP4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 SF3B4Q15427 424 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 PHLDA2Q53GA4 152 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 IRAK1BP1Q5VVH5 260 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 ZNF549Q6P9A3 640 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 BTNL8Q6UX41 500 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 TMEM139Q8IV31 216 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 FBXL14Q8N1E6 418 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 ZNF441Q8N8Z8 693 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 RSPH1Q8WYR4 309 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 C5orf30Q96GV9 206 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 ADGRG7Q96K78 797 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 PKP4Q99569 1192 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 ATG101Q9BSB4 218 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 SPXQ9BT56 116 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 S1PR5Q9H228 398 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 TMPRSS5Q9H3S3 457 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 FKRPQ9H9S5 495 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 RNPEPL1Q9HAU8 725 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 SLC38A7Q9NVC3 462 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 CYP39A1Q9NYL5 469 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 KIAA0586Q9BVV6 1533 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 KIF27Q86VH2 1401 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 ZNF521Q96K83 1311 aa4.95□□□□□ -1.62
HMGB1P3-201ENST00000502802 COL3A1P02461 1466 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P3-201ENST00000502802 BAG4O95429 457 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms