RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 RCN2Q14257 317 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 AMZ1Q400G9 498 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 ATG14Q6ZNE5 492 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 FAM47EQ6ZV65 393 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 TRIM42Q8IWZ5 723 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 CDK15Q96Q40 435 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 SGPP1Q9BX95 441 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.73■□□□□ 0.59
USP39-218ENST00000493829 NOL11Q9H8H0 719 aaKnown RBP18.73■□□□□ 0.59
USP39-218ENST00000493829 ZBTB26Q9HCK0 441 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 OR6C2Q9NZP2 312 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 PCDHGB2Q9Y5G2 931 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 LILRA5A6NI73 299 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 TCP11X1B4DZS4 312 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 E7EQ34 232 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 FLRT2O43155 660 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 UBXN7O94888 489 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 EPB42P16452 691 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 AMD1P17707 334 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 SLC1A6P48664 564 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 ABCE1P61221 599 aaKnown RBP18.72■□□□□ 0.59
USP39-218ENST00000493829 GNGT1P63211 74 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 CDC16Q13042 620 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 PERM1Q5SV97 790 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 ATG16L1Q676U5 607 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 EFL1Q7Z2Z2 1120 aaKnown RBP18.72■□□□□ 0.59
USP39-218ENST00000493829 ZNF438Q7Z4V0 828 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 MTERF4Q7Z6M4 381 aaKnown RBP18.72■□□□□ 0.59
USP39-218ENST00000493829 TRIM73Q86UV7 250 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 OOSP2Q86WS3 158 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 MYLK4Q86YV6 388 aaPredicted RBP18.72■□□□□ 0.59
USP39-218ENST00000493829 FAM181AQ8N9Y4 354 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 OR52B6Q8NGF0 335 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 RHBDD1Q8TEB9 315 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 ATP6V1E2Q96A05 226 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 MIPEPQ99797 713 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 C1QTNF3Q9BXJ4 246 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 C20orf27Q9GZN8 174 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 SYNDIG1Q9H7V2 258 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 IPPKQ9H8X2 491 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 SLCO1B3Q9NPD5 702 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 HRASLS2Q9NWW9 162 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 DYRK1BQ9Y463 629 aa18.72■□□□□ 0.59
USP39-218ENST00000493829 A0A1B0GTL3 188 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 PIPSLA2A3N6 862 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 OR7A17O14581 309 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 SH3BP5O60239 455 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 NPHS1O60500 1241 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 KATNA1O75449 491 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 PROS1P07225 676 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 CD59P13987 128 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 EPORP19235 508 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 PROX2Q3B8N5 592 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 ARL13AQ5H913 290 aaPredicted RBP18.71■□□□□ 0.59
USP39-218ENST00000493829 NAXDQ8IW45 347 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 OR6Y1Q8NGX8 325 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 HMGCLL1Q8TB92 370 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 PRR11Q96HE9 360 aaPredicted RBP18.71■□□□□ 0.59
USP39-218ENST00000493829 CNDP2Q96KP4 475 aaKnown RBP18.71■□□□□ 0.59
USP39-218ENST00000493829 CAPS2Q9BXY5 557 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 ACTR10Q9NZ32 417 aa18.71■□□□□ 0.59
USP39-218ENST00000493829 ARID1BQ8NFD5 2236 aaPredicted RBP18.71■□□□□ 0.59
USP39-218ENST00000493829 OR5K3A6NET4 321 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 TMEM114B3SHH9 223 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 UBFD1O14562 309 aaKnown RBP18.7■□□□□ 0.58
USP39-218ENST00000493829 CCND1P24385 295 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 GRK2P25098 689 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 MPSTP25325 297 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 PRDX3P30048 256 aaKnown RBP18.7■□□□□ 0.58
USP39-218ENST00000493829 LCP2Q13094 533 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 ARMC6Q6NXE6 501 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 TMPRSS11BQ86T26 416 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 KLHDC8AQ8IYD2 350 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 LSMEM2Q8N112 164 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 RAB3IL1Q8TBN0 382 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 NEIL2Q969S2 332 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 AHCYL2Q96HN2 611 aaKnown RBP18.7■□□□□ 0.58
USP39-218ENST00000493829 CNDP1Q96KN2 507 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 DRC3Q9H069 523 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 UCK1Q9HA47 277 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 MID1IP1Q9NPA3 183 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 FTSJ1Q9UET6 329 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 KLHL20Q9Y2M5 609 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 FIS1Q9Y3D6 152 aa18.7■□□□□ 0.58
USP39-218ENST00000493829 FAM221BA6H8Z2 402 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 PROB1E7EW31 1015 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 LDOC1O95751 146 aaPredicted RBP18.69■□□□□ 0.58
USP39-218ENST00000493829 CDH1P12830 882 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 UGT2B7P16662 529 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 NPPBP16860 134 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 CAPZBP47756 277 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 PIK3CGP48736 1102 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 CCNG1P51959 295 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 PRKAA1Q13131 559 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 SF1Q15637 639 aaKnown RBP18.69■□□□□ 0.58
USP39-218ENST00000493829 IRGCQ6NXR0 463 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 LCTLQ6UWM7 567 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 IFI44Q8TCB0 444 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 PPM1MQ96MI6 270 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 KLHL25Q9H0H3 589 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms