RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550		F8W8V4	182 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	GOLGA8T	H3BQL2	631 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	PEX12	O00623	359 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	LCE2B	O14633	110 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	PRMT5	O14744	637 aa	Predicted RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	CD3EAP	O15446	510 aa	Known RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	APOA4	P06727	396 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	MCM3	P25205	808 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	AOAH	P28039	575 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	NMBR	P28336	390 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	PPARG	P37231	505 aa	Predicted RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	KCNJ1	P48048	391 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	RAB28	P51157	221 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	RRAD	P55042	308 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	PER3	P56645	1201 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	BASP1	P80723	227 aa	Known RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	GRB7	Q14451	532 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	SF1	Q15637	639 aa	Known RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	CCSMST1	Q4G0I0	132 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	NKAIN1	Q4KMZ8	207 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	DNAJC21	Q5F1R6	531 aa	Known RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	MEI1	Q5TIA1	1274 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	VWA5B1	Q5TIE3	1220 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	TLDC1	Q6P9B6	456 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	FIGLA	Q6QHK4	219 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	TTLL10	Q6ZVT0	673 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	NLRP9	Q7RTR0	991 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	GSTA5	Q7RTV2	222 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	MRGPRE	Q86SM8	312 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	OTUD6B	Q8N6M0	293 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	ST6GALNAC3	Q8NDV1	305 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	SKA2	Q8WVK7	121 aa	Predicted RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	UBE2Q2	Q8WVN8	375 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	FAM136A	Q96C01	138 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	TSSK1B	Q9BXA7	367 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	SLC22A11	Q9NSA0	550 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	C5AR2	Q9P296	337 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	SLC39A10	Q9ULF5	831 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	OSGIN2	Q9Y236	505 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	NFS1	Q9Y697	457 aa		10.15	□□□□□ -0.78
HMGN1-215	ENST00000485550	NF1	P21359	2839 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	NDUFS3	O75489	264 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	UMOD	P07911	640 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	SNRPB2	P08579	225 aa	Known RBP	10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	MGAT1	P26572	445 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	BDKRB1	P46663	353 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	SIX1	Q15475	284 aa	Predicted RBP	10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	TRIP13	Q15645	432 aa	Predicted RBP	10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	CCNG2	Q16589	344 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	CRB2	Q5IJ48	1285 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	AARS2	Q5JTZ9	985 aa	Known RBP	10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	FCRL6	Q6DN72	434 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	MRPL14	Q6P1L8	145 aa	Known RBP	10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	SHISA6	Q6ZSJ9	500 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	DCUN1D3	Q8IWE4	304 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	GALNT16	Q8N428	558 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	METTL27	Q8N6F8	245 aa	Predicted RBP	10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	OR2Y1	Q8NGV0	311 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	GSDMB	Q8TAX9	411 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	PROKR1	Q8TCW9	393 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	PTER	Q96BW5	349 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	LURAP1	Q96LR2	239 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	FER1L6-AS2	Q96M78	137 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	C17orf62	Q9BQA9	187 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	MENT	Q9BUN1	341 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	TSGA10	Q9BZW7	698 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	CHRNA10	Q9GZZ6	450 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	LZTFL1	Q9NQ48	299 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	P4HTM	Q9NXG6	502 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	TACC2	O95359	2948 aa		10.14	□□□□□ -0.79
HMGN1-215	ENST00000485550	TCRBV7S3A2	A0A539	114 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	GOLGA6L6	A8MZA4	724 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	RASGRF2	O14827	1237 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	DIAPH2	O60879	1101 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	ALOX12B	O75342	701 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	SLCO2B1	O94956	709 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	VAPB	O95292	243 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	S1PR4	O95977	384 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	FGG	P02679	453 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	RPN2	P04844	631 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	PSMB5	P28074	263 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	FMO4	P31512	558 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	CXCR5	P32302	372 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	TTPA	P49638	278 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	VPS41	P49754	854 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	EIF3B	P55884	814 aa	Known RBP	10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	TMED2	Q15363	201 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	CYP2A13	Q16696	494 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	DCAF10	Q5QP82	559 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	TTC23L	Q6PF05	361 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	CNST	Q6PJW8	725 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	UNC5D	Q6UXZ4	953 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	OTOA	Q7RTW8	1153 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	PPP1R32	Q7Z5V6	425 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	CUZD1	Q86UP6	607 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	FJX1	Q86VR8	437 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	DTWD1	Q8N5C7	304 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	CLEC1A	Q8NC01	280 aa		10.13	□□□□□ -0.79

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