RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 PLA2G7Q13093 441 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 RBM39Q14498 530 aaKnown RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 KIR2DS3Q14952 304 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 GCNT6Q5T4J0 391 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 ADALQ6DHV7 355 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 DHRS7BQ6IAN0 325 aaPredicted RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 KLC3Q6P597 504 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 HAUS6Q7Z4H7 955 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 PCGF5Q86SE9 256 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 AACSQ86V21 672 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 PTOV1Q86YD1 416 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 PRPF31Q8WWY3 499 aaKnown RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 SEMA4DQ92854 862 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 STAMBPL1Q96FJ0 436 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 PGLYRP2Q96PD5 576 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 DUX3Q96PT4 197 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 SLC22A12Q96S37 553 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 SLX1AQ9BQ83 275 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 NUDT16L1Q9BRJ7 211 aaKnown RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 SPATC1LQ9H0A9 340 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 KCNK15Q9H427 330 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 APOBEC3GQ9HC16 384 aaKnown RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 HHATLQ9HCP6 504 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 SLC38A7Q9NVC3 462 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 MIOSQ9NXC5 875 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 WSB2Q9NYS7 404 aaPredicted RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 MRPL15Q9P015 296 aaKnown RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 JRKLQ9Y4A0 524 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 SNX8Q9Y5X2 465 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 KIF27Q86VH2 1401 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 ADGRG4Q8IZF6 3080 aa3.41□□□□□ -1.86
COPA-204ENST00000481522 COL5A2P05997 1499 aaPredicted RBP3.41□□□□□ -1.86
COPA-204ENST00000481522 ABCC6O95255 1503 aa3.4□□□□□ -1.86
COPA-204ENST00000481522 A8MV72 311 aaPredicted RBP3.4□□□□□ -1.87
COPA-204ENST00000481522 AHCYL1O43865 530 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 SSX4O60224 188 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 PRKNO60260 465 aaPredicted RBP3.4□□□□□ -1.87
COPA-204ENST00000481522 ENTPD3O75355 529 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 GJA1P17302 382 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 MATR3P43243 847 aaKnown RBP eCLIP3.4□□□□□ -1.87
COPA-204ENST00000481522 GLIPR1P48060 266 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 NR2C2P49116 596 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 LMAN1P49257 510 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 PCLAFQ15004 111 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 ALS2CLQ60I27 953 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 ZNF449Q6P9G9 518 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 GPALPP1Q8IXQ4 340 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 APPL2Q8NEU8 664 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 TM9SF4Q92544 642 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 MTERF3Q96E29 417 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 C17orf77Q96MU5 243 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 MXD3Q9BW11 206 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 MRPL1Q9BYD6 325 aaKnown RBP3.4□□□□□ -1.87
COPA-204ENST00000481522 LARSQ9P2J5 1176 aaKnown RBP3.4□□□□□ -1.87
COPA-204ENST00000481522 CHORDC1Q9UHD1 332 aaPredicted RBP3.4□□□□□ -1.87
COPA-204ENST00000481522 PLXNA1Q9UIW2 1896 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 RTTNQ86VV8 2226 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 WDR81Q562E7 1941 aa3.4□□□□□ -1.87
COPA-204ENST00000481522 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 BCORQ6W2J9 1755 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 A6NL46 340 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 PMS2P5A8MQ11 134 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 EDIL3O43854 480 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 PRAMEF11O60813 436 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 BEST1O76090 585 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 ZWINTO95229 277 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 GCNT3O95395 438 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 STARD3NLO95772 234 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 CAVIN2O95810 425 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 INHBAP08476 426 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 PAX1P15863 534 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 TRIM21P19474 475 aaKnown RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 NR1D1P20393 614 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 PSMC4P43686 418 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 LINC01547P58512 204 aaPredicted RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 PSMC6P62333 389 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 MFAP5Q13361 173 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 GRAPQ13588 217 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 MELKQ14680 651 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 NR1D2Q14995 579 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 CCDC6Q16204 474 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 MRGPRG-AS1Q2M3A8 158 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 IGSF11Q5DX21 431 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 CEP85LQ5SZL2 805 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 SFMBT2Q5VUG0 894 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 ADAM5Q6NVV9 412 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 SLC27A1Q6PCB7 646 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 CEACAM20Q6UY09 585 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 LDB1Q86U70 411 aaPredicted RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 LINC00346Q8IVM7 164 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 DCLK2Q8N568 766 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 OR10V1Q8NGI7 309 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 WDR20Q8TBZ3 569 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 ZNF473Q8WTR7 871 aaKnown RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 U2AF1L4Q8WU68 220 aaKnown RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 PTPMT1Q8WUK0 201 aaPredicted RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 SLC22A18Q96BI1 424 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 ERLEC1Q96DZ1 483 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 PRMT6Q96LA8 375 aaPredicted RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 FAM81BQ96LP2 452 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms