RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SEMA5AQ13591 1074 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 DNASE1L3Q13609 305 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 ERV3-1Q14264 604 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 GPR18Q14330 331 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 PRKD1Q15139 912 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-216ENST00000481048 TAZQ16635 292 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 LONRF2Q1L5Z9 754 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 ATP13A5Q4VNC0 1218 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 CRB2Q5IJ48 1285 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 ALS2CLQ60I27 953 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 METRNLQ641Q3 311 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 ZNF517Q6ZMY9 492 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-216ENST00000481048 HPS6Q86YV9 775 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 RFX6Q8HWS3 928 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 TRAPPC5Q8IUR0 188 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 D2HGDHQ8N465 521 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 SIDT2Q8NBJ9 832 aaKnown RBP6.29□□□□□ -1.4
LRCH3-216ENST00000481048 DDHD1Q8NEL9 900 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 SPATA22Q8NHS9 363 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 GDAP1Q8TB36 358 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 RSC1A1Q92681 617 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 P3H4Q92791 437 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 C1orf159Q96HA4 380 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 LRFN5Q96NI6 719 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 FCRL5Q96RD9 977 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 PACSIN1Q9BY11 444 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 ARFGAP3Q9NP61 516 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 ZNF71Q9NQZ8 489 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-216ENST00000481048 DLL4Q9NR61 685 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 SMOXQ9NWM0 555 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 IL17CQ9P0M4 197 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 ING1Q9UK53 422 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-216ENST00000481048 TRHDEQ9UKU6 1024 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 RARRES3Q9UL19 164 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 TMPRSS11EQ9UL52 423 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 DNAJC16Q9Y2G8 782 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 PKP3Q9Y446 797 aa6.29□□□□□ -1.4
LRCH3-216ENST00000481048 PCDHGA9Q9Y5G4 932 aaKnown RBP6.29□□□□□ -1.4
LRCH3-216ENST00000481048 IGHV5-51A0A0C4DH38 117 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 GLYATL1P3A0A0U1RQE8 302 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 C17orf113A0A1B0GUU1 675 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 UBA6A0AVT1 1052 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 SYCE3A1L190 88 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 PIPSLA2A3N6 862 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 C5orf60A6NFR6 353 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TLCD2A6NGC4 264 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 OR52A4PA6NMU1 304 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 C2orf81A6NN90 581 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 AGAP14A8MT82 685 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 MATN2O00339 956 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 PSTPIP1O43586 416 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 KIF1CO43896 1103 aaKnown RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 CST8O60676 142 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 PMPCBO75439 489 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 KATNA1O75449 491 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 ZNF189O75820 626 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 ZBTB11O95625 1053 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 KLK3P07288 261 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 GP1BBP13224 206 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 LPOP22079 712 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 PTPN4P29074 926 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 CDKN2BP42772 138 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 DRG2P55039 364 aaKnown RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 HADHBP55084 474 aaKnown RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 WNT3AP56704 352 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 GSDMDP57764 484 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TUBB4BP68371 445 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 WASHC5Q12768 1159 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 XRCC4Q13426 336 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TUBB3Q13509 450 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TUBB2AQ13885 445 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 SLC1A5Q15758 541 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 SEPT7Q16181 437 aaKnown RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 RPE65Q16518 533 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 UGT8Q16880 541 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 KHDC1Q4VXA5 237 aaKnown RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TFDP3Q5H9I0 405 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 SLC35F1Q5T1Q4 408 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TMTC4Q5T4D3 741 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 IZUMO3Q5VZ72 239 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 IRGCQ6NXR0 463 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TMEM220Q6QAJ8 160 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 KDELC1Q6UW63 502 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 MFSD7Q6UXD7 560 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 NPNTQ6UXI9 565 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 ASB18Q6ZVZ8 466 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 PID1Q7Z2X4 250 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 GLT6D1Q7Z4J2 308 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 SYVN1Q86TM6 617 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 RCOR2Q8IZ40 523 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 TTC30BQ8N4P2 665 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 RASGEF1AQ8N9B8 481 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 DTX3Q8N9I9 347 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 HEXDCQ8WVB3 486 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 MIB2Q96AX9 1013 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 LINC00615Q96LM1 132 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-216ENST00000481048 PPP1R2P1Q96PQ5 205 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 FERMT1Q9BQL6 677 aa6.28□□□□□ -1.4
LRCH3-216ENST00000481048 CCM2Q9BSQ5 444 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms