RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 GALPQ9UBC7 116 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 AP1M2Q9Y6Q5 423 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 FER1L5A0AVI2 2057 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 RELNP78509 3460 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 HEATR5BQ9P2D3 2071 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 ARGFXA6NJG6 315 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 C9J4A7 227 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 ZNF749O43361 778 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 CEACAM4O75871 244 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 HAUS5O94927 633 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 PDGFAP04085 211 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 ENO3P13929 434 aaPredicted RBP15.57■□□□□ 0.08
COL1A1-205ENST00000476387 MAGP20916 626 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 AGXTP21549 392 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 RPL21P46778 160 aaKnown RBP15.57■□□□□ 0.08
COL1A1-205ENST00000476387 CD97P48960 835 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 CALCOCO2Q13137 446 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 CUL1Q13616 776 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 NCF4Q15080 339 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 SF1Q15637 639 aaKnown RBP15.57■□□□□ 0.08
COL1A1-205ENST00000476387 ZIC1Q15915 447 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 COLEC12Q5KU26 742 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 HP1BP3Q5SSJ5 553 aaPredicted RBP15.57■□□□□ 0.08
COL1A1-205ENST00000476387 ZNF385CQ66K41 422 aaPredicted RBP15.57■□□□□ 0.08
COL1A1-205ENST00000476387 UGT3A1Q6NUS8 523 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 KIAA0408Q6ZU52 694 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 NEK10Q6ZWH5 1172 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 MAATS1Q7Z4T9 603 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 IGDCC3Q8IVU1 814 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 LMNTD1Q8N9Z9 388 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 SPATA4Q8NEY3 305 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 GIMAP7Q8NHV1 300 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 INPP5DQ92835 1189 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 PWWP2AQ96N64 755 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 GPR21Q99679 349 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 AARSD1Q9BTE6 412 aaKnown RBP15.57■□□□□ 0.08
COL1A1-205ENST00000476387 FAM60AQ9NP50 221 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 TRMT6Q9UJA5 497 aaKnown RBP15.57■□□□□ 0.08
COL1A1-205ENST00000476387 PADI2Q9Y2J8 665 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 PCDHGB7Q9Y5F8 929 aa15.57■□□□□ 0.08
COL1A1-205ENST00000476387 CLEC18AA5D8T8 446 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 KRT87PA6NCN2 255 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 FAM187AA6NFU0 413 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 ARHGEF33A8MVX0 844 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 H3BMH7 237 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 OR2B3O76000 313 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 FKBP9O95302 570 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 GABRA4P48169 554 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 CARSP49589 748 aaKnown RBP15.56■□□□□ 0.08
COL1A1-205ENST00000476387 C2orf54Q08AI8 447 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 PTCHD3Q3KNS1 767 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 CCSMST1Q4G0I0 132 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 LRRC8EQ6NSJ5 796 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 CLEC18BQ6UXF7 455 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 MED25Q71SY5 747 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 CNTN4Q8IWV2 1026 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 FAM20CQ8IXL6 584 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 TMEM102Q8N9M5 508 aaPredicted RBP15.56■□□□□ 0.08
COL1A1-205ENST00000476387 CLEC18CQ8NCF0 446 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 OR9A1PQ8NGU1 263 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 CD200R1Q8TD46 325 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 NDNQ99608 321 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 SLC30A3Q99726 388 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 PLAAQ9Y263 795 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 MED16Q9Y2X0 877 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 SNX24Q9Y343 169 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 DHRS7Q9Y394 339 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 TEX264Q9Y6I9 313 aa15.56■□□□□ 0.08
COL1A1-205ENST00000476387 USP9XQ93008 2570 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-205ENST00000476387 ZNF839A8K0R7 811 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 EIF3FO00303 357 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-205ENST00000476387 PSIP1O75475 530 aaKnown RBP15.55■□□□□ 0.08
COL1A1-205ENST00000476387 CD63P08962 238 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 MPC1LP0DKB6 136 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 CBSLP0DN79 551 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 CBSP35520 551 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 RGS4P49798 205 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 CCL11P51671 97 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 RRADP55042 308 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 PDIA2Q13087 525 aaKnown RBP15.55■□□□□ 0.08
COL1A1-205ENST00000476387 CHAF1BQ13112 559 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 UBAP2LQ14157 1087 aaKnown RBP15.55■□□□□ 0.08
COL1A1-205ENST00000476387 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.55■□□□□ 0.08
COL1A1-205ENST00000476387 STEAP4Q687X5 459 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 RHBDD2Q6NTF9 364 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 ATCAYQ86WG3 371 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 RAB43Q86YS6 212 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 HPS6Q86YV9 775 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 ANKMY2Q8IV38 441 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 CPNE9Q8IYJ1 553 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 HMGCLL1Q8TB92 370 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 PROKR1Q8TCW9 393 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 DPH5Q9H2P9 285 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 TAS2R13Q9NYV9 303 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 G3BP2Q9UN86 482 aaKnown RBP15.55■□□□□ 0.08
COL1A1-205ENST00000476387 SRPK3Q9UPE1 567 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 PLCL2Q9UPR0 1127 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 KLHL20Q9Y2M5 609 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 ZNF451Q9Y4E5 1061 aa15.55■□□□□ 0.08
COL1A1-205ENST00000476387 SPENQ96T58 3664 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms