RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PRR23BQ6ZRT6 265 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 CYP2U1Q7Z449 544 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 LMNTD1Q8N9Z9 388 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 ZNF548Q8NEK5 533 aaPredicted RBP16.17■□□□□ 0.18
TVP23B-202ENST00000476139 DDHD1Q8NEL9 900 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 BPIFB1Q8TDL5 484 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 NXPE3Q969Y0 559 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 AP2M1Q96CW1 435 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 MED8Q96G25 268 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 FRG2BQ96QU4 278 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 ZSCAN5AQ9BUG6 496 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 ATXN10Q9UBB4 475 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 ADGRE2Q9UHX3 823 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 INVSQ9Y283 1065 aa16.17■□□□□ 0.18
TVP23B-202ENST00000476139 ANXA6P08133 673 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 ELFN1P0C7U0 828 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 MYF6P23409 242 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 SLC6A11P48066 632 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 CLDN8P56748 225 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 DCDC1P59894 354 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 DDX39BQ13838 428 aaKnown RBP16.16■□□□□ 0.18
TVP23B-202ENST00000476139 NEDD8Q15843 81 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 TMEM259Q4ZIN3 620 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 RUNDC3AQ59EK9 446 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 GPR141Q7Z602 305 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 TCAIMQ8N3R3 496 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 PACRGLQ8N7B6 248 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 OR10Q1Q8NGQ4 319 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
TVP23B-202ENST00000476139 ZNF707Q96C28 371 aaPredicted RBP16.16■□□□□ 0.18
TVP23B-202ENST00000476139 PAIP1Q9H074 479 aaKnown RBP16.16■□□□□ 0.18
TVP23B-202ENST00000476139 ZDHHC4Q9NPG8 344 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 FBXO10Q9UK96 956 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 LINC01553A4QN01 128 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 E7EQ34 232 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 K7ESM1 405 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 XYLBO75191 536 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 CDH1P12830 882 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 CLCN2P51788 898 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 FPGSQ05932 587 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 LAPTM5Q13571 262 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 ZNF284Q2VY69 593 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 LRRC23Q53EV4 343 aaPredicted RBP16.16■□□□□ 0.18
TVP23B-202ENST00000476139 CYBRD1Q53TN4 286 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 GLYATL1Q969I3 302 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 PREBQ9HCU5 417 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 WBP1LQ9NX94 342 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 ASIC5Q9NY37 505 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 SMPD3Q9NY59 655 aaPredicted RBP16.16■□□□□ 0.18
TVP23B-202ENST00000476139 GPRC5BQ9NZH0 403 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 MARK1Q9P0L2 795 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 GULP1Q9UBP9 304 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 LIMD1Q9UGP4 676 aa16.16■□□□□ 0.18
TVP23B-202ENST00000476139 UPK1AO00322 258 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 GSTA4O15217 222 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 TULP3O75386 442 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 TCF3P15923 654 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 ELK4P28324 431 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 MMP12P39900 470 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 BDKRB1P46663 353 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 CDK9P50750 372 aaKnown RBP16.15■□□□□ 0.18
TVP23B-202ENST00000476139 GALK1P51570 392 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 IRF8Q02556 426 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 PMS2P3Q13401 168 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 NAE1Q13564 534 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 GGTA1PQ4G0N0 100 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 XKR6Q5GH73 641 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 HS3ST5Q8IZT8 346 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 OR4K3Q96R72 315 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 NAA50Q9GZZ1 169 aaKnown RBP16.15■□□□□ 0.18
TVP23B-202ENST00000476139 KAT8Q9H7Z6 458 aaKnown RBP16.15■□□□□ 0.18
TVP23B-202ENST00000476139 A0A087WXM4 84 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 KPNA5O15131 536 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 SLC16A8O95907 504 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 FTH1P02794 183 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 ADH5P11766 374 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 AMD1P17707 334 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 MAP4P27816 1152 aaKnown RBP16.15■□□□□ 0.18
TVP23B-202ENST00000476139 S100A3P33764 101 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 AP1S2P56377 157 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 SP140Q13342 867 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 GPR107Q5VW38 600 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 BORAQ6PGQ7 559 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 TMEM220Q6QAJ8 160 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 DPPA4Q7L190 304 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 THOC6Q86W42 341 aaKnown RBP16.15■□□□□ 0.18
TVP23B-202ENST00000476139 TMEM159Q96B96 161 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 THEGQ9P2T0 379 aa16.15■□□□□ 0.18
TVP23B-202ENST00000476139 ELOVL7A1L3X0 281 aa16.14■□□□□ 0.17
TVP23B-202ENST00000476139 SLC16A5O15375 505 aa16.14■□□□□ 0.17
TVP23B-202ENST00000476139 MYCLP1P12525 358 aaPredicted RBP16.14■□□□□ 0.17
TVP23B-202ENST00000476139 RANBP1P43487 201 aa16.14■□□□□ 0.17
TVP23B-202ENST00000476139 PPIGQ13427 754 aaKnown RBP eCLIP16.14■□□□□ 0.17
TVP23B-202ENST00000476139 SYTL3Q4VX76 610 aa16.14■□□□□ 0.17
TVP23B-202ENST00000476139 NOXRED1Q6NXP6 359 aa16.14■□□□□ 0.17
TVP23B-202ENST00000476139 FBXO46Q6PJ61 603 aaPredicted RBP16.14■□□□□ 0.17
TVP23B-202ENST00000476139 TMC5Q6UXY8 1006 aa16.14■□□□□ 0.17
TVP23B-202ENST00000476139 STK32CQ86UX6 486 aa16.14■□□□□ 0.17
TVP23B-202ENST00000476139 ZNF557Q8N988 423 aaPredicted RBP16.14■□□□□ 0.17
TVP23B-202ENST00000476139 HM13Q8TCT9 377 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms