RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 CUL3Q13618 768 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 PTPRCAPQ14761 206 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 RASA2Q15283 850 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 XKR6Q5GH73 641 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 SLC30A6Q6NXT4 461 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 RPUSD3Q6P087 351 aaKnown RBP4.74□□□□□ -1.65
SSB-209ENST00000470621 PTAR1Q7Z6K3 402 aaPredicted RBP4.74□□□□□ -1.65
SSB-209ENST00000470621 MARVELD2Q8N4S9 558 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 KLHDC1Q8N7A1 406 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 TDRD5Q8NAT2 981 aaKnown RBP4.74□□□□□ -1.65
SSB-209ENST00000470621 DBF4BQ8NFT6 615 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 OR6J1Q8NGC5 347 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 OR13C3Q8NGS6 347 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 ATL1Q8WXF7 558 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 ARSGQ96EG1 525 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 MAGED4Q96JG8 741 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 FAM71F1Q96KD3 344 aaPredicted RBP4.74□□□□□ -1.65
SSB-209ENST00000470621 FEVQ99581 238 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 SLC2A11Q9BYW1 496 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 TLE6Q9H808 572 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 PIH1D3Q9NQM4 214 aaKnown RBP4.74□□□□□ -1.65
SSB-209ENST00000470621 NKIRAS2Q9NYR9 191 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 SWAP70Q9UH65 585 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 GRID1Q9ULK0 1009 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 WDR37Q9Y2I8 494 aa4.74□□□□□ -1.65
SSB-209ENST00000470621 MYH14Q7Z406 1995 aaKnown RBP4.73□□□□□ -1.65
SSB-209ENST00000470621 ARPC2O15144 300 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 DUS4LO95620 317 aaKnown RBP4.73□□□□□ -1.65
SSB-209ENST00000470621 CSTF2P33240 577 aaKnown RBP eCLIP4.73□□□□□ -1.65
SSB-209ENST00000470621 LEPRP48357 1165 aaKnown RBP4.73□□□□□ -1.65
SSB-209ENST00000470621 PRPF4BQ13523 1007 aaKnown RBP4.73□□□□□ -1.65
SSB-209ENST00000470621 TNIP1Q15025 636 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 KYNUQ16719 465 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 TCTE1Q5JU00 501 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 LGI2Q8N0V4 545 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 RAB42Q8N4Z0 105 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 ANKRD13CQ8N6S4 541 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 OR4K1Q8NGD4 311 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 POM121L2Q96KW2 1035 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 FUCA2Q9BTY2 467 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 EGLN1Q9GZT9 426 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 ST6GALNAC4Q9H4F1 302 aa4.73□□□□□ -1.65
SSB-209ENST00000470621 KRTAP16-1A8MUX0 517 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 ARHGEF9O43307 516 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 MOCS3O95396 460 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 TBX6O95947 436 aaPredicted RBP4.72□□□□□ -1.65
SSB-209ENST00000470621 CSN3P07498 182 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 LUMP51884 338 aaPredicted RBP4.72□□□□□ -1.65
SSB-209ENST00000470621 HERV-K104P61576 105 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 SLC35D3Q5M8T2 416 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 ARMC4Q5T2S8 1044 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 KRT39Q6A163 491 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 UGT3A1Q6NUS8 523 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 OR8H2Q8N162 312 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 PI4KAP1Q8N8J0 262 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 ZNF485Q8NCK3 441 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 VANGL1Q8TAA9 524 aaPredicted RBP4.72□□□□□ -1.65
SSB-209ENST00000470621 SMAP2Q8WU79 429 aaPredicted RBP4.72□□□□□ -1.65
SSB-209ENST00000470621 C10orf90Q96M02 699 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 CLEC7AQ9BXN2 247 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 ASIC3Q9UHC3 531 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 EXOGQ9Y2C4 368 aaKnown RBP4.72□□□□□ -1.65
SSB-209ENST00000470621 CACNA1FO60840 1977 aa4.72□□□□□ -1.65
SSB-209ENST00000470621 CCL24O00175 119 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 AP5Z1O43299 807 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 GLRA3O75311 464 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 SEC24AO95486 1093 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 RNF224P0DH78 156 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 IRF2P14316 349 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 TYMPP19971 482 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 ACHEP22303 614 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 OPRL1P41146 370 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 NUCB1Q02818 461 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 RBPJQ06330 500 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 EXT1Q16394 746 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 SLC25A47Q6Q0C1 308 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 Q6ZRP5 223 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 IL17RELQ6ZVW7 336 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 DET1Q7L5Y6 550 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 HOGA1Q86XE5 327 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 ZNF614Q8N883 585 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 NIPA2Q8N8Q9 360 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 OR1L3Q8NH93 324 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 CENPTQ96BT3 561 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 FAM129AQ9BZQ8 928 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 TRPV4Q9HBA0 871 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 CDH20Q9HBT6 801 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 DNAJC4Q9NNZ3 241 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 MAN2C1Q9NTJ4 1040 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 OR6C2Q9NZP2 312 aa4.71□□□□□ -1.66
SSB-209ENST00000470621 CASTOR2A6NHX0 329 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 GGPS1O95749 300 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 LHCGRP22888 699 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 ASCL1P50553 236 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 RAB28P51157 221 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 CLDN15P56746 228 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 UBASH3AP57075 661 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 NPTX1Q15818 432 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 PHKG1Q16816 387 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms