RNA–Protein interactions for RNA: ENST00000463006.5

CNOT10-208, Transcript of CCR4-NOT transcription complex subunit 10, human

TSL 3

Gene CNOT10, Length 692 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT10-208	ENST00000463006	STXBP2	Q15833	593 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	CTU2	Q2VPK5	515 aa	Known RBP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	CEP55	Q53EZ4	464 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	LACTB2	Q53H82	288 aa	Predicted RBP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	C18orf63	Q68DL7	685 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	RAET1G	Q6H3X3	334 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	OR6B2	Q6IFH4	312 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	AFTPH	Q6ULP2	937 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	SYVN1	Q86TM6	617 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	ZC3HC1	Q86WB0	502 aa	Known RBP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	FOXRED2	Q8IWF2	684 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	RYBP	Q8N488	228 aa	Predicted RBP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	C1orf52	Q8N6N3	182 aa	Known RBP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	KIAA0895	Q8NCT3	520 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	SLC24A4	Q8NFF2	622 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	FAM216A	Q8WUB2	273 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	ITFG2	Q969R8	447 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	RAB7B	Q96AH8	199 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	FAM213A	Q9BRX8	229 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	THUMPD2	Q9BTF0	503 aa	Known RBP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	NAPB	Q9H115	298 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	ISCU	Q9H1K1	167 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	CARD9	Q9H257	536 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	VPS33B	Q9H267	617 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	SNX25	Q9H3E2	840 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	CATSPERB	Q9H7T0	1116 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	MAP6D1	Q9H9H5	199 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	DNAJC4	Q9NNZ3	241 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	SOHLH2	Q9NX45	425 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	TXNDC16	Q9P2K2	825 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	HPCAL4	Q9UM19	191 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	HBS1L	Q9Y450	684 aa	Known RBP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	ANGPTL3	Q9Y5C1	460 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	RAI2	Q9Y5P3	530 aa		4.22	□□□□□ -1.73
CNOT10-208	ENST00000463006	NOTCH4	Q99466	2003 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	GAGE12J	A6NER3	117 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006		A6NNC1	897 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	GPR89A	B7ZAQ6	455 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006		H0YCG3	227 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	TLR4	O00206	839 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	ANGPT2	O15123	496 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	MDM4	O15151	490 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	HSPA12A	O43301	675 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	PRAF2	O60831	178 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	OR6B1	O95007	311 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SNX4	O95219	450 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	CXCL14	O95715	111 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	GPR89B	P0CG08	455 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	KRT5	P13647	590 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	PRG2	P13727	222 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	UGT1A6	P19224	532 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	CDX1	P47902	265 aa	Predicted RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	CLDN20	P56880	219 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	TRA2B	P62995	288 aa	Known RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	PPP1R8	Q12972	351 aa	Known RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SCGB2A2	Q13296	93 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	PDE7A	Q13946	482 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	NPTX1	Q15818	432 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	CTF1	Q16619	201 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	DUSP6	Q16828	381 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	TAF1B	Q53T94	588 aa	Predicted RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	CCNYL2	Q5T2Q4	361 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	KRTAP5-11	Q6L8G4	156 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	IRGC	Q6NXR0	463 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	WDR88	Q6ZMY6	472 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	MACC1	Q6ZN28	852 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	MON1B	Q7L1V2	547 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	ATG9A	Q7Z3C6	839 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	TAF8	Q7Z7C8	310 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	TMPRSS11B	Q86T26	416 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	ADAMTSL2	Q86TH1	951 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	AMIGO1	Q86WK6	493 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	AADAT	Q8N5Z0	425 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SLC44A5	Q8NCS7	719 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	ACVR1C	Q8NER5	493 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	OR2AK2	Q8NG84	335 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SSMEM1	Q8WWF3	244 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SMPDL3B	Q92485	455 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	THRSP	Q92748	146 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	EPSTI1	Q96J88	318 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	ZNF559	Q9BR84	538 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	NTPCR	Q9BSD7	190 aa	Known RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	ZNF577	Q9BSK1	485 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	MMTAG2	Q9BU76	263 aa	Known RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	POLDIP3	Q9BY77	421 aa	Known RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	RAB17	Q9H0T7	212 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SEMA6A	Q9H2E6	1030 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	TMEM245	Q9H330	911 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	RIBC2	Q9H4K1	309 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SLA2	Q9H6Q3	261 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	COQ10B	Q9H8M1	238 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	MAGEF1	Q9HAY2	307 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	TINAG	Q9UJW2	476 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	DNPEP	Q9ULA0	475 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	PADI3	Q9ULW8	664 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006	LOXL2	Q9Y4K0	774 aa		4.21	□□□□□ -1.74
CNOT10-208	ENST00000463006		U3KQV3	271 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms