RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 GLMNQ92990 594 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ALPK1Q96QP1 1244 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 KCNH6Q9H252 994 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CWH43Q9H720 699 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 TRPS1Q9UHF7 1281 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 DAPK2Q9UIK4 370 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 INTS6Q9UL03 887 aaKnown RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CPSF4O95639 269 aaKnown RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 MT-ND2P03891 347 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 RETP07949 1114 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 NUDT7P0C024 238 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 HOXB9P17482 250 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ITIH1P19827 911 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 RPS3P23396 243 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 PSMB9P28065 219 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 HPCAL1P37235 193 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CTSOP43234 321 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 STK19P49842 368 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CLDN8P56748 225 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 FOXD4Q12950 439 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 MAD2L1Q13257 205 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CDH18Q13634 790 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 PAGE2BQ5JRK9 111 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ATG9BQ674R7 924 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 TXNDC8Q6A555 127 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ADNP2Q6IQ32 1131 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 SAPCD2Q86UD0 394 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CCDC71Q8IV32 467 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 PCSK9Q8NBP7 692 aaKnown RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 GLB1L3Q8NCI6 653 aaPredicted RBP13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF347Q96SE7 839 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 HMG20AQ9NP66 347 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 SLC22A14Q9Y267 594 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF451Q9Y4E5 1061 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 CPQQ9Y646 472 aa13.76□□□□□ -0.21
SCFD1-203ENST00000458591 KRBA1A5PL33 1030 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 SLC16A6O15403 523 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 WDR47O94967 919 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 HOXA9P31269 272 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TOP3AQ13472 1001 aaPredicted RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TAF12Q16514 161 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 ATP13A5Q4VNC0 1218 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 DGKKQ5KSL6 1271 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TPGS1Q6ZTW0 290 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 FKBP9P1Q75LS8 142 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TMEM150AQ86TG1 271 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 PIK3C3Q8NEB9 887 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 MYLIPQ8WY64 445 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 CLSTN3Q9BQT9 956 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 WDR12Q9GZL7 423 aaKnown RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TRIT1Q9H3H1 467 aaKnown RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 SACM1LQ9NTJ5 587 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 ATAD3AQ9NVI7 634 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 THG1LQ9NWX6 298 aaKnown RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 PDP1Q9P0J1 537 aaPredicted RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 LRFN2Q9ULH4 789 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 A0A096LPI6 279 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 CLDN25C9JDP6 229 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 H7C4K7 107 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 RFXANKO14593 260 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF821O75541 412 aaPredicted RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 DNAJB5O75953 348 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 NADKO95544 446 aaPredicted RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 PTCHD3Q3KNS1 767 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 INO80DQ53TQ3 878 aaPredicted RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 LRIF1Q5T3J3 769 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 SERPINA13PQ6UXR4 307 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 UBE2R2Q712K3 238 aaPredicted RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 NXPE1Q8N323 547 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TMEM132CQ8N3T6 1108 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TAMM41Q96BW9 452 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 SH3GL1Q99961 368 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 ELOVL6Q9H5J4 265 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 AASDHPPTQ9NRN7 309 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 DNMT3BQ9UBC3 853 aaKnown RBP13.75□□□□□ -0.21
SCFD1-203ENST00000458591 BTBD3Q9Y2F9 522 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 NAALAD2Q9Y3Q0 740 aa13.75□□□□□ -0.21
SCFD1-203ENST00000458591 TRBV5-4A0A0C4DH59 114 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 TTC36A6NLP5 189 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 NRG2O14511 850 aaPredicted RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 JRKO75564 520 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 LCKP06239 509 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ANXA5P08758 320 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 BMP4P12644 408 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ENGP17813 658 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 AQP1P29972 269 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 RYKP34925 604 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 HALP42357 657 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 MVKQ03426 396 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 DDX39BQ13838 428 aaKnown RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF648Q5T619 568 aaPredicted RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 PDE12Q6L8Q7 609 aaKnown RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 SHQ1Q6PI26 577 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms