RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LRRN3Q9H3W5 708 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 CCDC177Q9NQR7 707 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 INTS7Q9NVH2 962 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 SH2B3Q9UQQ2 575 aa17.38■□□□□ 0.37
TRAPPC4-203ENST00000447216 STX16-NPEPL1H3BU86 382 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 STX16O14662 325 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 TM4SF5O14894 197 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 PRICKLE3O43900 615 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 STK16O75716 305 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 BPGMP07738 259 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 DHRS4L1P0CG22 281 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 UGT2B7P16662 529 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 OAS2P29728 719 aaKnown RBP17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 GGT5P36269 586 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 PRKAA2P54646 552 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 GPLD1P80108 840 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 NFKB2Q00653 900 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 PRKAA1Q13131 559 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 PRAMEF13Q5VWM6 474 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 CAPN13Q6MZZ7 669 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 IRGCQ6NXR0 463 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 KLHL35Q6PF15 583 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 RAB44Q7Z6P3 723 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLC22A9Q8IVM8 553 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 KLHDC8AQ8IYD2 350 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 FLVCR1-AS1Q8TAF5 88 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 TGM7Q96PF1 710 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 OR2A14Q96R47 310 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 OR4K3Q96R72 315 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 MIPEPQ99797 713 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 NUDT22Q9BRQ3 303 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 TWSG1Q9GZX9 223 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLC32A1Q9H598 525 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 CNOT10Q9H9A5 744 aaKnown RBP17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 OXSMQ9NWU1 459 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 TMEM9Q9P0T7 183 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 TAC3Q9UHF0 121 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLC22A14Q9Y267 594 aa17.37■□□□□ 0.37
TRAPPC4-203ENST00000447216 SPAARA0A1B0GVQ0 90 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 C2orf74A8MZ97 194 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLC30A4O14863 429 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 GIPC1O14908 333 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 CAPN5O15484 640 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 MPSTP25325 297 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLC18A1P54219 525 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 KIR2DS3Q14952 304 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 PCBP2Q15366 365 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 UNC50Q53HI1 259 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 FAM92BQ6ZTR7 304 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 TMPRSS9Q7Z410 1059 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 TEX9Q8N6V9 391 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 CCNYL1Q8N7R7 359 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 SNX31Q8N9S9 440 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 OR2A1Q8NGT9 310 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 NSUN5Q96P11 429 aaKnown RBP17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 PITPNM3Q9BZ71 974 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 EPB41L1Q9H4G0 881 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 TOR4AQ9NXH8 423 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 OPTCQ9UBM4 332 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 KLHL3Q9UH77 587 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 PCTPQ9UKL6 214 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 POMT2Q9UKY4 750 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 CDV3Q9UKY7 258 aaKnown RBP17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 KLHL20Q9Y2M5 609 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 PCDHB11Q9Y5F2 797 aa17.36■□□□□ 0.37
TRAPPC4-203ENST00000447216 K7EPI3 171 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 ZW10O43264 779 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 KIF1CO43896 1103 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 RFPL3O75679 317 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 GP1BAP07359 652 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 RPS17P08708 135 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 HOXB3P14651 431 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 CHN1P15882 459 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 TSPAN8P19075 237 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 IMPDH1P20839 514 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 PRDX3P30048 256 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 LSSP48449 732 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 ATP1A2P50993 1020 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 HERVK_113P63132 956 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 SF1Q15637 639 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 RSPO4Q2I0M5 234 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 SNAP47Q5SQN1 464 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 ZNF678Q5SXM1 525 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 LIPMQ5VYY2 423 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 SPESP1Q6UW49 350 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 ZCCHC23Q6ZST2 131 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 LRRC70Q7Z2Q7 622 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 GOLGA7Q7Z5G4 137 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 NUDCD3Q8IVD9 361 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 CCDC126Q96EE4 140 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 GATA5Q9BWX5 397 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 ERVK-6Q9BXR3 956 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 KLHL25Q9H0H3 589 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 DNAJC11Q9NVH1 559 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 TNPO3Q9Y5L0 923 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 ENTPD2Q9Y5L3 495 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 ADAMTS20P59510 1910 aa17.35■□□□□ 0.37
TRAPPC4-203ENST00000447216 E2F3O00716 465 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 TRIM13O60858 407 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 SUPT7LO94864 414 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms