RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ARL14EPQ8N8R7 260 aaPredicted RBP5.48□□□□□ -1.53
C9orf3-205ENST00000427193 KIF18AQ8NI77 898 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 ABHD5Q8WTS1 349 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 MRPS31Q92665 395 aaKnown RBP5.48□□□□□ -1.53
C9orf3-205ENST00000427193 GOLGA1Q92805 767 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 FGF13Q92913 245 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 MSI2Q96DH6 328 aaKnown RBP5.48□□□□□ -1.53
C9orf3-205ENST00000427193 BTN2A3PQ96KV6 586 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 OLFM3Q96PB7 478 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 CSPG4P5Q96PW8 444 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 RNF157Q96PX1 679 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 RPP25Q9BUL9 199 aaKnown RBP5.48□□□□□ -1.53
C9orf3-205ENST00000427193 TUBB2BQ9BVA1 445 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 OSBPL8Q9BZF1 889 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 TKTL2Q9H0I9 626 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 SLCO5A1Q9H2Y9 848 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 LTB4R2Q9NPC1 389 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 GKN1Q9NS71 199 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 SELENONQ9NZV5 590 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 CDC23Q9UJX2 597 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 AGO1Q9UL18 857 aaKnown RBP5.48□□□□□ -1.53
C9orf3-205ENST00000427193 CCL26Q9Y258 94 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 SAR1BQ9Y6B6 198 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 ZFP37Q9Y6Q3 630 aaPredicted RBP5.48□□□□□ -1.53
C9orf3-205ENST00000427193 COL6A6A6NMZ7 2263 aa5.48□□□□□ -1.53
C9orf3-205ENST00000427193 ANKRD17O75179 2603 aaKnown RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 NOTCH2Q04721 2471 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 TRAV19A0A0A6YYK7 116 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 TMEM110-MUSTN1A8MSY1 372 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 SLC28A2O43868 658 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ACSL4O60488 711 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 CBFA2T3O75081 653 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 PENKP01210 267 aaPredicted RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ZNF806P0C7X5 589 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 MYL4P12829 197 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 LAMP2P13473 410 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 NDUFS1P28331 727 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 CASQ1P31415 396 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 SOX2P48431 317 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 NOVA1P51513 510 aaKnown RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 NME3Q13232 169 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 SIM2Q14190 667 aaPredicted RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 PAFAH1B3Q15102 231 aaKnown RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 SF3A2Q15428 464 aaKnown RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 OASLQ15646 514 aaKnown RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 MLF2Q15773 248 aaPredicted RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 CDO1Q16878 200 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 WHAMMP3Q1A5X7 153 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 SMTNL2Q2TAL5 461 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 COL28A1Q2UY09 1125 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ANKRD20A8PQ5CZ79 823 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 TFDP3Q5H9I0 405 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 FAM78AQ5JUQ0 283 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 MPP7Q5T2T1 576 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 FBXL22Q6P050 247 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 C19orf48Q6RUI8 117 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ARID3BQ8IVW6 561 aaPredicted RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ARHGAP12Q8IWW6 846 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 UNC45BQ8IWX7 931 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 UMODL1-AS1Q8N2C9 162 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 UBL4BQ8N7F7 174 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 MAB21L3Q8N8X9 362 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 PRELID2Q8N945 189 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 RNF139Q8WU17 664 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ASB5Q8WWX0 329 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 SMARCD2Q92925 531 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 SLCO2A1Q92959 643 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 IGSF8Q969P0 613 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ALG14Q96F25 216 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 RBM41Q96IZ5 413 aaKnown RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ZNF479Q96JC4 524 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 PRICKLE1Q96MT3 831 aaPredicted RBP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 DCLK3Q9C098 648 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 LRRC19Q9H756 370 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ZBTB26Q9HCK0 441 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 FZD3Q9NPG1 666 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.47□□□□□ -1.53
C9orf3-205ENST00000427193 ETNK2Q9NVF9 386 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 GPATCH2LQ9NWQ4 482 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 OR12D3Q9UGF7 316 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 PCSK1NQ9UHG2 260 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 CDH7Q9ULB5 785 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 NEUROG3Q9Y4Z2 214 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 OR51B4Q9Y5P0 310 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 CPQQ9Y646 472 aa5.47□□□□□ -1.53
C9orf3-205ENST00000427193 CHD5Q8TDI0 1954 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 KIF26AQ9ULI4 1882 aaPredicted RBP5.46□□□□□ -1.54
C9orf3-205ENST00000427193 KIR2DS5A0A0G2JLQ3 304 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 CXorf51AA0A1B0GTR3 108 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 GOLGA6L7A0A1B0GV03 622 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 LRRD1A4D1F6 860 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 SHISA7A6NL88 538 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 E9PAM4 449 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 APOC4-APOC2K7ER74 178 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 KIR2DS3K7RE56 304 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 ATG13O75143 517 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 ECI2O75521 394 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 APOC2P02655 101 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 FGGP02679 453 aa5.46□□□□□ -1.54
C9orf3-205ENST00000427193 NGFRP08138 427 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms