RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PLCD3Q8N3E9 789 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 TP53I13Q8NBR0 393 aaPredicted RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 PLA2G15Q8NCC3 412 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 OR9A1PQ8NGU1 263 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 ZNF480Q8WV37 535 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 ASB12Q8WXK4 309 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 GTF2H4Q92759 462 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 FOXJ1Q92949 421 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SLCO4A1Q96BD0 722 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 TMEM74Q96NL1 305 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 CCDC115Q96NT0 180 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 NECTIN4Q96NY8 510 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 NR1H4Q96RI1 486 aaPredicted RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 CGREF1Q99674 301 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 RPP25Q9BUL9 199 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 ZDHHC5Q9C0B5 715 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 ATG10Q9H0Y0 220 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 ALG2Q9H553 416 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 NANOGQ9H9S0 305 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 BATF3Q9NR55 127 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 CCM2LQ9NUG4 571 aaPredicted RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 GMPR2Q9P2T1 348 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 DLGAP4Q9Y2H0 992 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 AP4S1Q9Y587 144 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SNX13Q9Y5W8 968 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 TCRBV5S2A0A599 114 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 IGLON5A6NGN9 336 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 E7EQ34 232 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 PLRG1O43660 514 aaKnown RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 KCNH1O95259 989 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 PGRP06401 933 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 GPIP06744 558 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 RPSAP08865 295 aaKnown RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 UMPSP11172 480 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 NTSR1P30989 418 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 CTHP32929 405 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 HALP42357 657 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SOX9P48436 509 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 CLCN2P51788 898 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 GTF2A1P52655 376 aaPredicted RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 TBPL1P62380 186 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 MRPS35P82673 323 aaKnown RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 LIPEQ05469 1076 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 INPP5AQ14642 412 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 ARHGAP19Q14CB8 494 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SLC44A4Q53GD3 710 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SGO1Q5FBB7 561 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 MTX3Q5HYI7 312 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 RABL3Q5HYI8 236 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SPANXN4Q5MJ08 99 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 ATG9BQ674R7 924 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 ANO7Q6IWH7 933 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 CAPN13Q6MZZ7 669 aaPredicted RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 FAM83HQ6ZRV2 1179 aaPredicted RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 LRRTM4Q86VH4 590 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 DCUN1D3Q8IWE4 304 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 MSRB3Q8IXL7 192 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 LAS2Q8IYD9 372 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 CFAP206Q8IYR0 622 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 CHPFQ8IZ52 775 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 HDDC3Q8N4P3 179 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SMRP1Q8NCR6 262 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 PAPD5Q8NDF8 572 aaKnown RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 ST13P5Q8NFI4 369 aaPredicted RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 OR52E4Q8NGH9 312 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SETD7Q8WTS6 366 aaKnown RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 PKP2Q99959 881 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 EFHD1Q9BUP0 239 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 IL1RL2Q9HB29 575 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 ZDHHC4Q9NPG8 344 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SLAMF8Q9P0V8 285 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 SERGEFQ9UGK8 458 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 ZNHIT2Q9UHR6 403 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 ZFR2Q9UPR6 939 aaKnown RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 MAPRE3Q9UPY8 281 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 RUVBL1Q9Y265 456 aaKnown RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 DTNAQ9Y4J8 743 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 PCDHB3Q9Y5E6 796 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 PCDHGA11Q9Y5H2 935 aa8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 PCYT1BQ9Y5K3 369 aaPredicted RBP8.77□□□□□ -1.01
LINCMD1-201ENST00000418518 A0A096LPI6 279 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 KANSL1LA0AUZ9 987 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 DHRS12A0PJE2 317 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 FOXE1O00358 373 aaPredicted RBP8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 KMOO15229 486 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 KCNJ13O60928 360 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 ERN1O75460 977 aaKnown RBP8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 PCCBP05166 539 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 UQCRBP14927 111 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 NPPBP16860 134 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 POU3F3P20264 500 aaPredicted RBP8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 KELP23276 732 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 PTPN6P29350 595 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 HSD17B2P37059 387 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 GRIA3P42263 894 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 DGKQP52824 942 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 AQP4P55087 323 aa8.76□□□□□ -1.01
LINCMD1-201ENST00000418518 PHC1P78364 1004 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms