RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 WDR47O94967 919 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 SIX3O95343 332 aaPredicted RBP22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 CSRP1P21291 193 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 CCND1P24385 295 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 EEF1DP29692 281 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 IRGCQ6NXR0 463 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 GLRX5Q86SX6 157 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 THOC6Q86W42 341 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 C10orf107Q8IVU9 208 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 KLHDC8AQ8IYD2 350 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 SLC22A18Q96BI1 424 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 PAIP2Q9BPZ3 127 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 INTS7Q9NVH2 962 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 ASB1Q9Y576 335 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 PCDHB11Q9Y5F2 797 aa22.8■■□□□ 1.24
TSPAN4-203ENST00000397397 A0A1W2PQM1 296 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 MATN2O00339 956 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 TM4SF5O14894 197 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 PRICKLE3O43900 615 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 RFPL3O75679 317 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 UGT2B7P16662 529 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 NR1D1P20393 614 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 PSMB5P28074 263 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 ALDH3A1P30838 453 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 SERPINB4P48594 390 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 PRKAA2P54646 552 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 PRAMEF13Q5VWM6 474 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 MECRQ9BV79 373 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 ACAT2Q9BWD1 397 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 TWSG1Q9GZX9 223 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 ABCG4Q9H172 646 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 OXSMQ9NWU1 459 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 OPTCQ9UBM4 332 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 TAC3Q9UHF0 121 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 ATXN7L1Q9ULK2 861 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 SLC22A14Q9Y267 594 aa22.79■■□□□ 1.24
TSPAN4-203ENST00000397397 CAPN5O15484 640 aaPredicted RBP22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 BPGMP07738 259 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 DHRS4L1P0CG22 281 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 CSF2RBP32927 897 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 PPP1CAP62136 330 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 CFHR1Q03591 330 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 ILKQ13418 452 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 PCBP2Q15366 365 aaKnown RBP eCLIP22.78■■□□□ 1.244e-6■■■■□ 22.4
TSPAN4-203ENST00000397397 LRRC70Q7Z2Q7 622 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 SNX31Q8N9S9 440 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 MDM1Q8TC05 714 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 ZDHHC12Q96GR4 267 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 TGM7Q96PF1 710 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 TMEM237Q96Q45 408 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 OR2A14Q96R47 310 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 GFM1Q96RP9 751 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 RAB33BQ9H082 229 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 PCBD2Q9H0N5 130 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 DNAJC11Q9NVH1 559 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 EPHA6Q9UF33 1036 aa22.78■■□□□ 1.24
TSPAN4-203ENST00000397397 WDR91A4D1P6 747 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 K7EPI3 171 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 CPNE6O95741 557 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 IMPDH1P20839 514 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 PRDX3P30048 256 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 GFERP55789 205 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 WDR4P57081 412 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 DNAJB13P59910 316 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 HERVK_113P63132 956 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 SQSTM1Q13501 440 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 SF1Q15637 639 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 LIPMQ5VYY2 423 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 WDR74Q6RFH5 385 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 SPESP1Q6UW49 350 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 LCTLQ6UWM7 567 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 PLXDC1Q8IUK5 500 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 NUDCD3Q8IVD9 361 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 OR2A1Q8NGT9 310 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 FLVCR1-AS1Q8TAF5 88 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 OR4K3Q96R72 315 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 MIPEPQ99797 713 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 NUDT22Q9BRQ3 303 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 ERVK-6Q9BXR3 956 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 POMT2Q9UKY4 750 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 DYRK1BQ9Y463 629 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 ANGPTL3Q9Y5C1 460 aa22.77■■□□□ 1.24
TSPAN4-203ENST00000397397 UNC13CQ8NB66 2214 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 SPAARA0A1B0GVQ0 90 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 PCNX2A6NKB5 2137 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 TRIM13O60858 407 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 NPPBP16860 134 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 E2F1Q01094 437 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 ASPHQ12797 758 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 ZNF678Q5SXM1 525 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 FAM92BQ6ZTR7 304 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 TRIM73Q86UV7 250 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 FAM20CQ8IXL6 584 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 TEX9Q8N6V9 391 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 SREK1Q8WXA9 508 aaKnown RBP22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 L3HYPDHQ96EM0 354 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 HAUS8Q9BT25 410 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 ACSS2Q9NR19 701 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 TOR4AQ9NXH8 423 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 KLHL3Q9UH77 587 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms