RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PRAMEF14Q5SWL7 426 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 METRNLQ641Q3 311 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 OGFOD2Q6N063 350 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 BNC2Q6ZN30 1099 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-207ENST00000397200 LRRC74BQ6ZQY2 392 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 GK5Q6ZS86 529 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 CHCHD4Q8N4Q1 142 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 CCL4L1Q8NHW4 92 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 GPBAR1Q8TDU6 330 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 SKA2Q8WVK7 121 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ZNF570Q96NI8 536 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 SERPINI1Q99574 410 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 LRRC61Q9BV99 259 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 AKTIPQ9H8T0 292 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 SPASTQ9UBP0 616 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 TSR3Q9UJK0 312 aaKnown RBP14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ZNF225Q9UK10 706 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ACSL5Q9ULC5 683 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ADAMTS9Q9P2N4 1935 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 KNL1Q8NG31 2342 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 CACNA1HO95180 2353 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ANPEPP15144 967 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 GPX3P22352 226 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ARRB1P49407 418 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-207ENST00000397200 CLCNKAP51800 687 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 PKNOX1P55347 436 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 STX5Q13190 355 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ELOCQ15369 112 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ZNF423Q2M1K9 1284 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 FAM219BQ5XKK7 198 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 C8orf82Q6P1X6 216 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-207ENST00000397200 SLC30A9Q6PML9 568 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 IL27RAQ6UWB1 636 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 HACD2Q6Y1H2 254 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 TAF8Q7Z7C8 310 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 SYVN1Q86TM6 617 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 HPS6Q86YV9 775 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 VRK3Q8IV63 474 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 SLC22A15Q8IZD6 547 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 MYO1HQ8N1T3 1032 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 KCNA7Q96RP8 456 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ELF4Q99607 663 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ZDHHC5Q9C0B5 715 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 DPEP2Q9H4A9 486 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 CAAP1Q9H8G2 361 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 S100A14Q9HCY8 104 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 SEMA4BQ9NPR2 832 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-207ENST00000397200 POLG2Q9UHN1 485 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 GMEB2Q9UKD1 530 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 OARD1Q9Y530 152 aa14.48□□□□□ -0.09
CAPN3-207ENST00000397200 ANKRD12Q6UB98 2062 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 RALGAPA1Q6GYQ0 2036 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 PRR19A6NJB7 356 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 FBP2O00757 339 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 SNX2O60749 519 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 SORBS2O94875 1100 aaKnown RBP14.47□□□□□ -0.09
CAPN3-207ENST00000397200 MATN4O95460 622 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 RETP07949 1114 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 SYPP08247 313 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 SLC35G4P0C7Q5 338 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 MPC1LP0DKB6 136 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 UROSP10746 265 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 RPL10P27635 214 aaKnown RBP14.47□□□□□ -0.09
CAPN3-207ENST00000397200 PDHA2P29803 388 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 C1orf61Q13536 156 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 METTL2BQ6P1Q9 378 aaKnown RBP14.47□□□□□ -0.09
CAPN3-207ENST00000397200 XKR5Q6UX68 686 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 NEK10Q6ZWH5 1172 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 NRROSQ86YC3 692 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 PIAS4Q8N2W9 510 aaPredicted RBP14.47□□□□□ -0.09
CAPN3-207ENST00000397200 SUMF1Q8NBK3 374 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 LMX1AQ8TE12 382 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 UBTD2Q8WUN7 234 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 CCT7Q99832 543 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 SLC25A23Q9BV35 468 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 WDR41Q9HAD4 459 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 FSCN3Q9NQT6 498 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 NMRK1Q9NWW6 199 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 CD274Q9NZQ7 290 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 ASB1Q9Y576 335 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 TNPO3Q9Y5L0 923 aaKnown RBP14.47□□□□□ -0.09
CAPN3-207ENST00000397200 PCDH15Q96QU1 1955 aa14.47□□□□□ -0.09
CAPN3-207ENST00000397200 PDZK1P1A8MUH7 402 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 IFRD1O00458 451 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-207ENST00000397200 ARHGAP33O14559 1287 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 KHNYNO15037 678 aaKnown RBP14.46□□□□□ -0.09
CAPN3-207ENST00000397200 DFNA5O60443 496 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 PIAS2O75928 621 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 CELA2BP08218 269 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-207ENST00000397200 ACADSP16219 412 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 RXRGP48443 463 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 HLA-BQ31612 363 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 AGKQ53H12 422 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 REP15Q6BDI9 236 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 PDZD3Q86UT5 571 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 GKN2Q86XP6 184 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 FUNDC1Q8IVP5 155 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 ZNF548Q8NEK5 533 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-207ENST00000397200 FOPNLQ96NB1 174 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 NPAS2Q99743 824 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms