RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 MTHFD2P13995 350 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 KRT4P19013 534 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 CRHR1P34998 444 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 GGT5P36269 586 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 SLC6A12P48065 614 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 KCNC1P48547 511 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 CCT5P48643 541 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 ABATP80404 500 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 FOXC1Q12948 553 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 NAE1Q13564 534 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 ZXDCQ2QGD7 858 aaPredicted RBP15.84■□□□□ 0.13
AP1S3-202ENST00000396653 PRAMEF13Q5VWM6 474 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 SUSD1Q6UWL2 747 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 LCTLQ6UWM7 567 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 HDXQ7Z353 690 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 C2orf73Q8N5S3 287 aaPredicted RBP15.84■□□□□ 0.13
AP1S3-202ENST00000396653 PPFIBP2Q8ND30 876 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 OR2L3Q8NG85 312 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 UBTD2Q8WUN7 234 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 ALKBH8Q96BT7 664 aaKnown RBP15.84■□□□□ 0.13
AP1S3-202ENST00000396653 SLC41A2Q96JW4 573 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 SCYL1Q96KG9 808 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 CHRNA10Q9GZZ6 450 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 CNOT10Q9H9A5 744 aaKnown RBP15.84■□□□□ 0.13
AP1S3-202ENST00000396653 INTS7Q9NVH2 962 aaKnown RBP15.84■□□□□ 0.13
AP1S3-202ENST00000396653 WWOXQ9NZC7 414 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 ANKMY1Q9P2S6 941 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 PTBP2Q9UKA9 531 aaKnown RBP15.84■□□□□ 0.13
AP1S3-202ENST00000396653 WASF3Q9UPY6 502 aa15.84■□□□□ 0.13
AP1S3-202ENST00000396653 NCF1BA6NI72 391 aaPredicted RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 NCF1CA8MVU1 366 aaPredicted RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 UBXN8O00124 270 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 COPEO14579 308 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 HYAL3O43820 417 aaPredicted RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 KIF1CO43896 1103 aaKnown RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 MYZAPP0CAP1 466 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 NCF1P14598 390 aaPredicted RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 MPSTP25325 297 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 PSMB5P28074 263 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 CMPK1P30085 196 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 CSTF2P33240 577 aaKnown RBP eCLIP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 LSSP48449 732 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 PRDX1Q06830 199 aaKnown RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 TARDBPQ13148 414 aaKnown RBP eCLIP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 C16orf72Q14CZ0 275 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 SF1Q15637 639 aaKnown RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 SNAP47Q5SQN1 464 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 ICE2Q659A1 982 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 SRRM1Q8IYB3 904 aaKnown RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 AGBL5Q8NDL9 886 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 EXT2Q93063 718 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 MED8Q96G25 268 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 APOPT1Q96IL0 206 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 TRAPPC9Q96Q05 1148 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 CMKLR1Q99788 373 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 MIPEPQ99797 713 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 TMEM79Q9BSE2 394 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 HAUS8Q9BT25 410 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 ATG10Q9H0Y0 220 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 STMN4Q9H169 189 aaPredicted RBP15.83■□□□□ 0.12
AP1S3-202ENST00000396653 TMEM216Q9P0N5 145 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 TAC3Q9UHF0 121 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 GRID1Q9ULK0 1009 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 ACTL7BQ9Y614 415 aa15.83■□□□□ 0.12
AP1S3-202ENST00000396653 DCHS1Q96JQ0 3298 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 IGHV5-51A0A0C4DH38 117 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 GOLGA6L10A6NI86 522 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 A8MU76 341 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 FOXO6A8MYZ6 492 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 TARM1B6A8C7 271 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 TK2O00142 265 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 MAP2K7O14733 419 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 TAPBPO15533 448 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 MSL3P1P0C860 447 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 ST6GAL1P15907 406 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 NELFEP18615 380 aaKnown RBP15.82■□□□□ 0.12
AP1S3-202ENST00000396653 HRH2P25021 359 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 ALDH18A1P54886 795 aaKnown RBP15.82■□□□□ 0.12
AP1S3-202ENST00000396653 TSTA3Q13630 321 aaPredicted RBP15.82■□□□□ 0.12
AP1S3-202ENST00000396653 SETDB1Q15047 1291 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 PTCHD3Q3KNS1 767 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 CCDC153Q494R4 210 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 THEMIS2Q5TEJ8 643 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 METTL2BQ6P1Q9 378 aaKnown RBP15.82■□□□□ 0.12
AP1S3-202ENST00000396653 ERMP1Q7Z2K6 904 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 LRRC70Q7Z2Q7 622 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 TRIM73Q86UV7 250 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 C4orf33Q8N1A6 199 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 D2HGDHQ8N465 521 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 FBXO39Q8N4B4 442 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 TMEM151AQ8N4L1 468 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 C19orf47Q8N9M1 422 aaKnown RBP15.82■□□□□ 0.12
AP1S3-202ENST00000396653 BANPQ8N9N5 519 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 RCBTB1Q8NDN9 531 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 WDR36Q8NI36 951 aaKnown RBP15.82■□□□□ 0.12
AP1S3-202ENST00000396653 PPM1MQ96MI6 270 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 SMC6Q96SB8 1091 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 MRPS30Q9NP92 439 aaKnown RBP15.82■□□□□ 0.12
AP1S3-202ENST00000396653 NEUROG3Q9Y4Z2 214 aa15.82■□□□□ 0.12
AP1S3-202ENST00000396653 FAM149AA5PLN7 773 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms