RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ATP6AP1LQ52LC2 224 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 LIPMQ5VYY2 423 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FGD2Q7Z6J4 655 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CMTR2Q8IYT2 770 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 DUS2Q9NX74 493 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 COQ4Q9Y3A0 265 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 U3KQ87 197 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 SMLR1H3BR10 107 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FABP7O15540 132 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 SIGLEC6O43699 453 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 SOX30O94993 753 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 SLC25A27O95847 323 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 GMPRP36959 345 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CLCN3P51790 818 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 NXNL2Q5VZ03 156 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 MAP1SQ66K74 1059 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 THEM5Q8N1Q8 247 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 DNERQ8NFT8 737 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 C3orf49Q96BT1 292 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 DUS3LQ96G46 650 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CCDC115Q96NT0 180 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 GMLQ99445 158 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 GAS2L1Q99501 681 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 GATA5Q9BWX5 397 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ACE2Q9BYF1 805 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ASB7Q9H672 318 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ABCB8Q9NUT2 735 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 KCNIP3Q9Y2W7 256 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 MROH6A6NGR9 719 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 UBXN8O00124 270 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ACKR2O00590 384 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 NDUFS6O75380 124 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 JUNP05412 331 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 RFC2P35250 354 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 GNALP38405 381 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 IDH2P48735 452 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 OAZ1P54368 228 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CDH8P55286 799 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 NKX3-2P78367 333 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 KCNAB2Q13303 367 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 TEX44Q53QW1 395 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ARL13AQ5H913 290 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 DRICH1Q6PGQ1 229 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 METTL7BQ6UX53 244 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 MON1BQ7L1V2 547 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FAM131BQ86XD5 332 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FOXRED2Q8IWF2 684 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ZDHHC14Q8IZN3 488 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 MEIOBQ8N635 442 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ZSCAN1Q8NBB4 408 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 HTR3CQ8WXA8 447 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 FATE1Q969F0 183 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 LENG9Q96B70 501 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 NPAS1Q99742 590 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
NPHP4-202ENST00000378161 ACOT9Q9Y305 439 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 CMAHPQ9Y471 501 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 A3GALT2U3KPV4 340 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 RGPD2P0DJD1 1756 aa11.51□□□□□ -0.57
NPHP4-202ENST00000378161 COL1A1P02452 1464 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-202ENST00000378161 TCRBV3S1A0A5B6 114 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 M0QYT0 321 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 MMP20O60882 483 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 CNTN5O94779 1100 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 RNF224P0DH78 156 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 HLA-DMAP28067 261 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 PNPLA4P41247 253 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 RRAS2P62070 204 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-202ENST00000378161 EMX1Q04741 257 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-202ENST00000378161 MXD1Q05195 221 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 CD47Q08722 323 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 INCA1Q0VD86 236 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 NUDT18Q6ZVK8 323 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 CPNE8Q86YQ8 564 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 ZDHHC17Q8IUH5 632 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 MAFIPQ8WZ33 124 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 LRRC46Q96FV0 321 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 NEDD4LQ96PU5 975 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 PAPOLGQ9BWT3 736 aaKnown RBP11.5□□□□□ -0.57
NPHP4-202ENST00000378161 ALG2Q9H553 416 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 LDAHQ9H6V9 325 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 ZBTB20Q9HC78 741 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-202ENST00000378161 GPRC5BQ9NZH0 403 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 LAMP5Q9UJQ1 280 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 INTS6Q9UL03 887 aaKnown RBP11.5□□□□□ -0.57
NPHP4-202ENST00000378161 METTL15A6NJ78 407 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 HSPA12AO43301 675 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 TOXO94900 526 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 SERPINF2P08697 491 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 NCK1P16333 377 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 PGAM1P18669 254 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 LIPEQ05469 1076 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 GALNT2Q10471 571 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 MINDY4Q4G0A6 757 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 C9orf152Q5JTZ5 239 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 C1orf94Q6P1W5 598 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 DYNC2LI1Q8TCX1 351 aa11.5□□□□□ -0.57
NPHP4-202ENST00000378161 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms