RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TGFB1P01137 390 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 MMP8P22894 467 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 APLP1P51693 650 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 EVX2Q03828 476 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 THEM6Q8WUY1 208 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 GNG8Q9UK08 70 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 SLC22A1O15245 554 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 GABBR2O75899 941 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 CKMT2P17540 419 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 TUBA4AP68366 448 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 BTBD16Q32M84 506 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PLEKHG6Q3KR16 790 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PDCD4Q53EL6 469 aaKnown RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 MIPEPQ99797 713 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 FUZQ9BT04 418 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 ITPAQ9BY32 194 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 CMAHPQ9Y471 501 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 NWD1Q149M9 1564 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 ISPDA4D126 451 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 C4BPAP04003 597 aaKnown RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 CDKN1CP49918 316 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 HYAL2Q12891 473 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 ATXN7L3Q14CW9 347 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PRICKLE1Q96MT3 831 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 HERC2P3Q9BVR0 1158 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 HCN3Q9P1Z3 774 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 CACNG4Q9UBN1 327 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 TNS2Q63HR2 1409 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 SLC31A1O15431 190 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 CDH1P12830 882 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 ENGP17813 658 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PSMA6P60900 246 aaKnown RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 RHEBQ15382 184 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 DACT2Q5SW24 774 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 SLC22A8Q8TCC7 542 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 SEC61A2Q9H9S3 476 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 RDH8Q9NYR8 311 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 OR6C75A6NL08 312 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 IRF6O14896 467 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 CILPO75339 1184 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 EIF5AP63241 154 aaKnown RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 METTL21CQ5VZV1 264 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 LCLAT1Q6UWP7 414 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 ANKRD23Q86SG2 305 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PNLDC1Q8NA58 520 aaKnown RBP15.7■□□□□ 0.1
COL18A1-203ENST00000359759 DEC1Q9P2X7 70 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PCDHGB7Q9Y5F8 929 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PRPS2P11908 318 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 RHOQP17081 205 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 MLLT10P55197 1068 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 HID1Q8IV36 788 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ERI1Q8IV48 349 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 LGI4Q8N135 537 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 TMBIM1Q969X1 311 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 SLC38A3Q99624 504 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 MND1Q9BWT6 205 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ADAP2Q9NPF8 381 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 A0A1W2PRB8 838 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 MATN3O15232 486 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 XPNPEP2O43895 674 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 BCHEP06276 602 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ZNF8P17098 575 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 RPS3AP61247 264 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 SLC10A7Q0GE19 358 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 TMEM110Q86TL2 294 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 GALNT12Q8IXK2 581 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ZNF611Q8N823 705 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 MKL1Q969V6 931 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 HIPK3Q9H422 1215 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 GTF2IRD1Q9UHL9 959 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 FAM234BA2RU67 622 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 TRIM64CA6NLI5 447 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 DIRAS1O95057 198 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 KAT7O95251 611 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 GJA1P17302 382 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 RPP38P78345 283 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 MSL3Q8N5Y2 521 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 OR5M3Q8NGP4 307 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 PYCR2Q96C36 320 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 LIN28AQ9H9Z2 209 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 FZD10Q9ULW2 581 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 CNTN6Q9UQ52 1028 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ZNF726A6NNF4 738 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ENTPD6O75354 484 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 C8GP07360 202 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ERVK-21P61565 698 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 DAG1Q14118 895 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 SGCBQ16585 318 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 LRRC37A5PQ49AS3 106 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 TRMT10BQ6PF06 316 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 MAFIPQ8WZ33 124 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 XKR8Q9H6D3 395 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 DUS2Q9NX74 493 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 CRISP3P54108 245 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 DSC3Q14574 896 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ANKDD1AQ495B1 522 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 HGSNATQ68CP4 663 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 TMEM145Q8NBT3 493 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 CASTOR1Q8WTX7 329 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ZBED6CLQ96FA7 236 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms