RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PPEF2O14830 753 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GSTM3P21266 225 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 VIPR1P32241 457 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 MBLAC2Q68D91 279 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 C3orf33Q6P1S2 294 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 UNQ6126/PRO20091Q6UXV3 157 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 CTU1Q7Z7A3 348 aaKnown RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 KLHL36Q8N4N3 616 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GLB1L3Q8NCI6 653 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 NR4A3Q92570 626 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 EFCAB11Q9BUY7 163 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 RIOK2Q9BVS4 552 aaKnown RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GHRLQ9UBU3 117 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 TLR6Q9Y2C9 796 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 SMCO3A2RU48 225 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 ARVCFO00192 962 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 CSTBP04080 98 aaKnown RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 UGT1A1P22309 533 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GADD45AP24522 165 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 BDH1Q02338 343 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 SCARB2Q14108 478 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 REP15Q6BDI9 236 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 CIR1Q86X95 450 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 ARL10Q8N8L6 244 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 KCT2Q8NC54 265 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 C15orf40Q8WUR7 153 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 HAS1Q92839 578 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 KLK6Q92876 244 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GATA6Q92908 595 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 C8orf48Q96LL4 319 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 TBATAQ96M53 351 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 LYARQ9NX58 379 aaKnown RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 RIMKLBQ9ULI2 386 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 ENPP3O14638 875 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GP1BBP13224 206 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 SLC1A2P43004 574 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 HSPA7P48741 367 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 ARPC4P59998 168 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 MPP1Q00013 466 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GPR33Q49SQ1 333 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 SPIN3Q5JUX0 258 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 PRAMEF14Q5SWL7 426 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 IL23RQ5VWK5 629 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 PRAMEF13Q5VWM6 474 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GRHL2Q6ISB3 625 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 GDF6Q6KF10 455 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 ZC3H14Q6PJT7 736 aaKnown RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 MMAAQ8IVH4 418 aaKnown RBP5.42□□□□□ -1.54
PTPRD-202ENST00000356435 C7orf57Q8NEG2 295 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 PCED1BQ96HM7 432 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 LPIN3Q9BQK8 851 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 DUSP26Q9BV47 211 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 FMN2Q9NZ56 1722 aa5.42□□□□□ -1.54
PTPRD-202ENST00000356435 FARS2O95363 451 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 HMGN1P05114 100 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 BPGMP07738 259 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF30P17039 623 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 MPSTP25325 297 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 L1CAMP32004 1257 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 MLC1Q15049 377 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SF3B4Q15427 424 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TSTD2Q5T7W7 516 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 RABEPKQ7Z6M1 372 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TUBGCP5Q96RT8 1024 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TIGARQ9NQ88 270 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TCRBV21S2A2A0A5A6 115 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 HTR3EA5X5Y0 456 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TSPAN9O75954 239 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 NADKO95544 446 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 IFNA21P01568 189 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 HOXB2P14652 356 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 HOXB9P17482 250 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CTBP2P56545 445 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CLRN1P58418 232 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PLP2Q04941 152 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 USP30Q70CQ3 517 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 KCNK18Q7Z418 384 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CMC1Q7Z7K0 106 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 RAB43Q86YS6 212 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 LNX2Q8N448 690 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 YIPF7Q8N8F6 280 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CMTM7Q96FZ5 175 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 NPAS2Q99743 824 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 C1orf21Q9H246 121 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PEX16Q9Y5Y5 336 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ERI3O43414 337 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PCDH7O60245 1069 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PCDHGA12O60330 932 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 HRGP04196 525 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 GBX2P52951 348 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 RPL7AP62424 266 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PDCD4Q53EL6 469 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF554Q86TJ5 538 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ALYREFQ86V81 257 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SLC7A6OSQ96CW6 309 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 AP4B1Q9Y6B7 739 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 A0A1W2PRU2 124 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 E2F3O00716 465 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms