RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SUSD6Q92537 303 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 MED8Q96G25 268 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 FCRL1Q96LA6 429 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 CCDC115Q96NT0 180 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 OR4K3Q96R72 315 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 OR2AG1Q9H205 316 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 TRIM39Q9HCM9 518 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 AP3M1Q9Y2T2 418 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 MYO9BQ13459 2157 aa19.76■□□□□ 0.75
CHRNA3-202ENST00000348639 E7EQ34 232 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 SOCS2O14508 198 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 CLGNO14967 610 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 LINC01565O15544 149 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 GGT1P19440 569 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 TACR1P25103 407 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 S100A3P33764 101 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 OPRD1P41143 372 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 HNF4AP41235 474 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 PHC1P78364 1004 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 CYP4F3Q08477 520 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 RUNX3Q13761 415 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 DOC2AQ14183 400 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 RUNDC3AQ59EK9 446 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 COL13A1Q5TAT6 717 aaPredicted RBP19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 GRHL2Q6ISB3 625 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 CPA6Q8N4T0 437 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 CSGALNACT1Q8TDX6 532 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 APOLD1Q96LR9 279 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 TSSK3Q96PN8 268 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 THUMPD3Q9BV44 507 aaKnown RBP19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 LMAN2LQ9H0V9 348 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 MAN2B2Q9Y2E5 1009 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 LRRK1Q38SD2 2015 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 TRBV5-3A0A0A0MS03 114 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 FAM149AA5PLN7 773 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 C1QTNF3-AMACRE9PGA6 284 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 H0YIV9 168 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 ERN1O75460 977 aaKnown RBP19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 C1orf105O95561 183 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 EPHX1P07099 455 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 GJA4P35212 333 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 IL12RB1P42701 662 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 CCR3P51677 355 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 NOXRED1Q6NXP6 359 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 TRAPPC5Q8IUR0 188 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 CHERPQ8IWX8 916 aaKnown RBP19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 RIMKLAQ8IXN7 391 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 YAF2Q8IY57 180 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 CFAP206Q8IYR0 622 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 TNIP2Q8NFZ5 429 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 OR2T12Q8NG77 320 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 ZNF514Q96K75 400 aaPredicted RBP19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 LINC00615Q96LM1 132 aaPredicted RBP19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 GBP5Q96PP8 586 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 HHIPQ96QV1 700 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 HDAC8Q9BY41 377 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 OSBPL6Q9BZF3 934 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 PLA2G2FQ9BZM2 168 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 FAM192AQ9GZU8 254 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 KCNH6Q9H252 994 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 RMND5AQ9H871 391 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 PCDHGB4Q9UN71 923 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 PCDHGB5Q9Y5G0 923 aa19.75■□□□□ 0.75
CHRNA3-202ENST00000348639 SAC3D1A6NKF1 404 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 PSMC3P17980 439 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 TXNL4AP83876 142 aaKnown RBP19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 FCHO2Q0JRZ9 810 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 LRIF1Q5T3J3 769 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 EPHX4Q8IUS5 362 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 CDCA3Q99618 268 aaPredicted RBP19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 C9orf16Q9BUW7 83 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 PAIP1Q9H074 479 aaKnown RBP19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 IKZF5Q9H5V7 419 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 PRSS16Q9NQE7 514 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 SERHLQ9NQF3 203 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 SPATA6Q9NWH7 488 aaPredicted RBP19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 THAP10Q9P2Z0 257 aaPredicted RBP19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 ATXN10Q9UBB4 475 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 VPS29Q9UBQ0 182 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 CIDEBQ9UHD4 219 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 CDH7Q9ULB5 785 aa19.74■□□□□ 0.75
CHRNA3-202ENST00000348639 KIAA1549LQ6ZVL6 1849 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 A0A096LPI6 279 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 C17orf113A0A1B0GUU1 675 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 GMNNO75496 209 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 TNFAIP8O95379 198 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 ANXA6P08133 673 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 FAM58BPP0C7Q3 252 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 CDH1P12830 882 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 P2RY2P41231 377 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 GTF2H3Q13889 308 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 GK3PQ14409 553 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 MFSD2AQ8NA29 543 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 ZNF548Q8NEK5 533 aaPredicted RBP19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 OR10A6Q8NH74 314 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 RAB7BQ96AH8 199 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 ITCHQ96J02 903 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 TRAPPC9Q96Q05 1148 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 KXD1Q9BQD3 176 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 GORASP2Q9H8Y8 452 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms