RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 IKZF5Q9H5V7 419 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 IRAK4Q9NWZ3 460 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 ADGRE2Q9UHX3 823 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 ERVW-1Q9UQF0 538 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 FOXD2O60548 495 aaPredicted RBP21.6■■□□□ 1.05
CCDC9-201ENST00000221922 NOL3O60936 208 aaKnown RBP21.6■■□□□ 1.05
CCDC9-201ENST00000221922 SCELO95171 688 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 ATP1B2P14415 290 aaPredicted RBP21.6■■□□□ 1.05
CCDC9-201ENST00000221922 NTHL1P78549 312 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 PPP2R2BQ00005 443 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 FAM174BQ3ZCQ3 159 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 TMEM215Q68D42 235 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 RFLNAQ6ZTI6 216 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 SMYD1Q8NB12 490 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 DNAJB8Q8NHS0 232 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 ASB11Q8WXH4 323 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 SDCCAG3Q96C92 435 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 MBOAT4Q96T53 435 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 THUMPD3Q9BV44 507 aaKnown RBP21.6■■□□□ 1.05
CCDC9-201ENST00000221922 CLMPQ9H6B4 373 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 ZFP14Q9HCL3 533 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 SLC25A37Q9NYZ2 338 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 SNX6Q9UNH7 406 aa21.6■■□□□ 1.05
CCDC9-201ENST00000221922 CFAP99D6REC4 459 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 POLR2EP19388 210 aaKnown RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 CCNA2P20248 432 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 GSTM2P28161 218 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 HSPA14Q0VDF9 509 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 SKIV2LQ15477 1246 aaKnown RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 RUNDC3AQ59EK9 446 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 FBXO30Q8TB52 745 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 SKA2Q8WVK7 121 aaPredicted RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 SNX19Q92543 992 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 MAGEB10Q96LZ2 347 aaPredicted RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 ZSWIM3Q96MP5 696 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 ABCG8Q9H221 673 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 LIMD1Q9UGP4 676 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 WNT6Q9Y6F9 365 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 ELOVL7A1L3X0 281 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 LINC01553A4QN01 128 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 C5orf67F2Z3F1 127 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 SLC9A3R1O14745 358 aaPredicted RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 CST1P01037 141 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 POU2F2P09086 479 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 CYP2A7P20853 494 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 IRS1P35568 1242 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 DCDC1P59894 354 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 CAMK1Q14012 370 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 MOGQ16653 247 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 R3HCC1LQ7Z5L2 792 aaKnown RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 FRS2Q8WU20 508 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 NRBF2Q96F24 287 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 SLC47A1Q96FL8 570 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 MRGPRX3Q96LB0 322 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 HEPHQ9BQS7 1158 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 PAIP1Q9H074 479 aaKnown RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 GPN2Q9H9Y4 310 aaPredicted RBP21.59■■□□□ 1.05
CCDC9-201ENST00000221922 TBC1D23Q9NUY8 699 aa21.59■■□□□ 1.05
CCDC9-201ENST00000221922 TRBV5-3A0A0A0MS03 114 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 TSPAN11A1L157 253 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 PGRP06401 933 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 VIPR1P32241 457 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 AP1S2P56377 157 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 RAB15P59190 212 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 CPSF6Q16630 551 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCDC9-201ENST00000221922 ANKDD1AQ495B1 522 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 USP39Q53GS9 565 aaKnown RBP21.58■■□□□ 1.05
CCDC9-201ENST00000221922 SPANXN4Q5MJ08 99 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 GTF2IRD2BQ6EKJ0 949 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 NEK10Q6ZWH5 1172 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 GRASPQ7Z6J2 395 aaPredicted RBP21.58■■□□□ 1.05
CCDC9-201ENST00000221922 GTF2IRD2Q86UP8 949 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 RBM4BQ9BQ04 359 aaKnown RBP21.58■■□□□ 1.05
CCDC9-201ENST00000221922 RBM4Q9BWF3 364 aaKnown RBP21.58■■□□□ 1.05
CCDC9-201ENST00000221922 AMBRA1Q9C0C7 1298 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 SMURF2Q9HAU4 748 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 RAD18Q9NS91 495 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 TMPRSS11EQ9UL52 423 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 PCDHGA8Q9Y5G5 932 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 HCFC2Q9Y5Z7 792 aa21.58■■□□□ 1.05
CCDC9-201ENST00000221922 PLXNA2O75051 1894 aa21.58■■□□□ 1.04
CCDC9-201ENST00000221922 ALPK3Q96L96 1907 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 C16orf96A6NNT2 1141 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 CXCR6O00574 342 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 ZNF197O14709 1029 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 AP2A2O94973 939 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 RETP07949 1114 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 EPORP19235 508 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 SLC6A12P48065 614 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 NRIP1P48552 1158 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 VASPP50552 380 aaPredicted RBP21.57■■□□□ 1.04
CCDC9-201ENST00000221922 IST1P53990 364 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 GABARAPL2P60520 117 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 BNIP3Q12983 259 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 XKR5Q6UX68 686 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 DET1Q7L5Y6 550 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 SPARTQ8N0X7 666 aa21.57■■□□□ 1.04
CCDC9-201ENST00000221922 CHDHQ8NE62 594 aaPredicted RBP21.57■■□□□ 1.04
CCDC9-201ENST00000221922 RAB2BQ8WUD1 216 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms