RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Slc25a14Q9Z2B2 325 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Catsperg2C6KI89 1145 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn2r114E9Q281 856 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn2r91E9Q2U5 856 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm19965J3QNY8 723 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slc16a8O35308 492 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 P06324 132 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hoxc8P09025 242 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nfkb1P25799 971 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Myo1dQ5SYD0 1006 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr1364Q5SZS9 314 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fam169aQ5XG69 665 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 HadhQ61425 314 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fam149b1Q6NSV7 578 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr1288Q7TQY0 312 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr169Q7TS53 313 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rap2aQ80ZJ1 183 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Znf410Q8BKX7 478 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Phtf2Q8CB19 747 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Asb2Q8K0L0 634 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Oas1hQ8VI97 369 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Asb9Q91ZT8 290 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tcam1Q99NB3 548 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ska1Q9CPV1 254 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 ArskQ9D2L1 553 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dusp26Q9D700 211 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dap3Q9ER88 391 aaKnown RBP11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Elovl2Q9JLJ4 292 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Enpp2Q9R1E6 862 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pramef25A2ASI9 494 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Armc4B2RY50 1037 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gpr50O88495 591 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Scrg1O88745 98 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slc22a8O88909 537 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cd93O89103 644 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Stfa3P35173 103 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slc19a1P41438 512 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rps3P62908 243 aaKnown RBP11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 InhbbQ04999 411 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Igfbp5Q07079 271 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr381Q5SSP0 311 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tmem151bQ68FE7 561 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dcaf13Q6PAC3 445 aaKnown RBP11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ranbp10Q6VN19 620 aaKnown RBP11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Wfikkn2Q7TQN3 571 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slc2a12Q8BFW9 622 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nod1Q8BHB0 953 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rbms2Q8VC70 383 aaKnown RBP11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 TraipQ8VIG6 470 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pcdhga11Q91XY8 933 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tex13bQ99MW5 186 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 XpotQ9CRT8 963 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Zswim1Q9CWV7 455 aaKnown RBP11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dcdc2cQ9D1B8 347 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 MispQ9D279 648 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 C1qtnf3Q9ES30 246 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm7535F7CXE4 302 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm44G3UW88 330 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm5724L7N264 670 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Npc1O35604 1277 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Stc1O55183 247 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Arl6O88848 186 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cyp8b1O88962 500 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 PahP16331 453 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 F2P19221 618 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Bmp6P20722 510 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Etv2P41163 335 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Mapkapk2P49138 386 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 E2f2P56931 443 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rnf215Q5SPX3 379 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tnpo3Q6P2B1 923 aaKnown RBP11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Shkbp1Q6P7W2 704 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dlgap3Q6PFD5 977 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Adgrd1Q80T32 903 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Eme1Q8BJW7 570 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dnajc27Q8CFP6 273 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Arel1Q8CHG5 823 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ces2aQ8QZR3 558 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Mrgpra2Q91WW4 305 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tm4sf4Q91XD3 202 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Coro6Q920M5 471 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pin4Q9CWW6 131 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gemin6Q9CX53 166 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Kat8Q9D1P2 458 aa11.29□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rpl9-ps6A0A140T8T4 192 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ccdc163A2AGD7 326 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slc25a54B1AUS6 473 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cdc25bP30306 576 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rpl9P51410 192 aaKnown RBP11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fubp3Q3TIX6 575 aaKnown RBP11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ccdc61Q3UJV1 511 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Q3UY34 256 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pik3c3Q6PF93 887 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Coq4Q8BGB8 266 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ppm1nQ8BGL1 404 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tmem214Q8BM55 687 aaKnown RBP11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ckap4Q8BMK4 575 aaKnown RBP11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 PgghgQ8BP56 690 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cpne3Q8BT60 533 aa11.28□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nrip1Q8CBD1 1161 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms