RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Hcrtr1P58307 416 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Q32M26 199 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Itpripl2Q3UV16 535 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Fads6Q80UG1 342 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Zdhhc5Q8VDZ4 715 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 PclafQ9CQX4 110 aaKnown RBP22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Glod5Q9D8I3 148 aa22.26■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Dnajb3O35723 242 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Ncam1P13595 1115 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Uap1l1Q3TW96 507 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Fam129aQ3UW53 926 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Taar7fQ5QD08 358 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cept1Q8BGS7 416 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Klf8Q8BLM0 355 aaKnown RBP22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Mab21L3Q8CI17 429 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Krt5Q922U2 580 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 PpidQ9CR16 370 aaKnown RBP22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 C1qtnf3Q9ES30 246 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 CntrlA2AL36 2334 aa22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tet2Q4JK59 1912 aaKnown RBP22.25■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Rhox2gL7MUB9 191 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Galnt1O08912 559 aaKnown RBP22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 P01664 111 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Mkl2P59759 1080 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Foxk2Q3UCQ1 651 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Zfp868Q3UTQ6 422 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 PtprnQ60673 979 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Klhl14Q69ZK5 630 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Lats2Q7TSJ6 1042 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Scamp1Q8K021 338 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Ms4a10Q99N03 267 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 CygbQ9CX80 190 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Rai2Q9QVY8 529 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Serpina3jD3Z451 420 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr798Q7TRH8 311 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cpped1Q8BFS6 312 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Grsf1Q8C5Q4 479 aaKnown RBP22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pcdhgb5Q91XX5 926 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Paqr5Q9DCU0 330 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Jph3Q9ET77 744 aa22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 VapbQ9QY76 243 aaKnown RBP22.24■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Igkv17-127A0A0G2JDN5 117 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 AccsA2AIG8 502 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Xkr6E9Q6C8 638 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Zfp946F6VWU8 523 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Jak1P52332 1153 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Treml2Q2LA85 329 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 D17Wsu92eQ3TT38 291 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Fam196aQ3USH1 422 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 A630001G21RikQ3UTB2 229 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Znf513Q6PD29 541 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 PdprQ7TSQ8 878 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Fbxo46Q8BG80 603 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Vrk2Q8BN21 503 aaKnown RBP22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Arhgap19Q8BRH3 494 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Rab15Q8K386 212 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Chrna3Q8R4G9 499 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr535Q8VGL3 312 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pcyt2Q922E4 404 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Acer3Q9D099 267 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Dnaaf1Q9D2H9 634 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cd320Q9Z1P5 260 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Brca2P97929 3329 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Dock6Q8VDR9 2080 aa22.23■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm6509A0A0J9YUV1 481 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Vmn2r-ps130A0A140T8U3 855 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm5145F8VQ88 278 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm6351K9J7D1 481 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Vmn2r44L7N2E1 861 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Phxr1P15973 60 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Zic1P46684 447 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Rbbp7Q60973 425 aaKnown RBP22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Sim1Q61045 765 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pcbp2Q61990 362 aaKnown RBP22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Sdr16c5Q7TQA3 309 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr1344Q7TQV3 321 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cabcoco1Q8CDT7 208 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Abhd11Q8K4F5 307 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr1093Q8VF14 322 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 NgrnQ99KS2 293 aaKnown RBP22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cnot11Q9CWN7 505 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Bcas2Q9D287 225 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Ccdc130Q9D516 385 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tmem114Q9D563 222 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pkmyt1Q9ESG9 490 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tssc4Q9JHE7 317 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 CdylQ9WTK2 593 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Rai1Q61818 1889 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Skint1A7TZE6 364 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 2210016F16RikG3X8U3 338 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Vmn1r169L7N275 304 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Bmp7P23359 430 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm4981Q3ULJ8 291 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm5460Q3UQ97 254 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Foxs1Q61574 329 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr594Q7TRR4 311 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Lrrtm4Q80XG9 590 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cdh7Q8BM92 785 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Chrnb3Q8BMN3 464 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Rdh1Q8CGV4 317 aa22.22■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms