RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ebf2O08792 575 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Chil3O35744 398 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pxmp2P42925 194 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sat1P48026 171 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sox1P53783 391 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Bcl2a1Q07440 172 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Perm1Q149B8 807 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Axdnd1Q3UZ57 424 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ifi47Q61635 420 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mep1bQ61847 704 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sec24dQ6NXL1 1032 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 RfflQ6ZQM0 377 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sra1Q80VJ2 232 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Btbd10Q80X66 475 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 CslQ80X68 466 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Clec4gQ8BNX1 294 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Myoz3Q8R4E4 245 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc22a6Q8VC69 545 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1276Q8VF40 312 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr868Q8VFI8 309 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pcdhb21Q91V48 774 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Hdac11Q91WA3 347 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cxxc5Q91WA4 317 aaKnown RBP8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tmem68Q9D850 329 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Q9DAR0 182 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zbp1Q9QY24 411 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 CroccQ8CJ40 2009 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfhx2Q2MHN3 2562 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Vmn2r-ps130A0A140T8U3 855 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Srp72F8VQC1 671 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 LcatP16301 438 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 InhbcP55104 352 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sephs2P97364 452 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zfp956Q3UZY6 572 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr381Q5SSP0 311 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Adora2bQ60614 332 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dnajc8Q6NZB0 253 aaKnown RBP8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pcdh19Q80TF3 1145 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Klf8Q8BLM0 355 aaKnown RBP8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ccdc28bQ8CEG5 200 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 CopaQ8CIE6 1224 aaKnown RBP8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Defb35Q8R2I3 63 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1302Q8VGE9 315 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1414Q8VGU5 312 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 3300002I08RikQ9CXH3 147 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Agpat5Q9D1E8 365 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Mcemp1Q9D8U6 183 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fem1aaQ9Z2G1 654 aa8.46□□□□□ -1.06
Trim39-201ENSMUST00000042717 Igkv17-127A0A0G2JDN5 117 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 TprnA2AI08 749 aaKnown RBP8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Prrt4B2RU40 902 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lrrc31F6VYM1 502 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pld3O35405 488 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tgfb3P17125 410 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Eno2P17183 434 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 TrhrP21761 393 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ephx2P34914 554 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tnfsf4P43488 198 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zic1P46684 447 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm14226Q3TZL0 686 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Xkr9Q5GH62 373 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Proser1Q5PRE5 913 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Il1rapQ61730 570 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Adamtsl4Q80T21 1036 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Trim50Q810I2 483 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Stk32aQ8BGW6 398 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Q8BHB7 409 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gpr18Q8K1Z6 331 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ccm2Q8K2Y9 453 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Adap2Q8R2V5 381 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Akr1c13Q8VC28 323 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr659Q8VGV6 322 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 1700069L16RikQ9D9H5 109 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dhx34Q9DBV3 1145 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 CrotQ9DC50 612 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rpl38Q9JJI8 70 aaKnown RBP8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Katna1Q9WV86 491 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Znf711A2ANX9 761 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm14862B1AV28 81 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm15155B1B034 138 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cyp2a22B2RXZ2 492 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Vmn2r57L7N269 863 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 PdynO35417 248 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ift81O35594 676 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hnrnpa2b1O88569 353 aaKnown RBP8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 P01664 111 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Mcpt1P11034 246 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 CatP24270 527 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 AcadmP45952 421 aaKnown RBP8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Epb42P49222 691 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tbpl1P62340 186 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 UrodP70697 367 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Abraxas2Q3TCJ1 415 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Mthfd1lQ3V3R1 977 aaKnown RBP8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nr0b2Q62227 260 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ces2bQ6PDB7 556 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pih1d2Q8CHR9 315 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dclre1cQ8K4J0 705 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zdhhc5Q8VDZ4 715 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Aim2Q91VJ1 354 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms