RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 H2afb1S4R1E0 115 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 H2afb3S4R1G7 115 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm45837F7D3W5 961 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Got2P05202 430 aaKnown RBP16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lrrc39Q8BGI7 337 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tns4Q8BZ33 696 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Atat1Q8K341 421 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sertad2Q9JJG5 309 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cntnap5aQ0V8T9 1304 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm7970L7N271 213 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm7980L7N471 213 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ighg1P01869 393 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mkrn3Q60764 544 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr735Q7TRM4 354 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Zfp446Q8C9M8 523 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Nudt17Q9CWD3 296 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kntc1Q8C3Y4 2207 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cyp2b23E9Q593 491 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 PnpP23492 289 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Capza1P47753 286 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 StacP97306 403 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Etv6P97360 485 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lemd2Q6DVA0 511 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tatdn1Q6P8M1 295 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Scara5Q8K299 491 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Arl6ip5Q8R5J9 188 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Q8WUR0 141 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm8369E9PZI3 166 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Prl6a1O35257 230 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lamp1P11438 406 aaKnown RBP16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mab21l2Q8BPP1 359 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr45Q8VGM1 311 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Atp6v1g1Q9CR51 118 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 D430041D05RikF6ZGR6 1678 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pcm1Q9R0L6 2025 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lman2lP59481 347 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tmed3Q78IS1 221 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr664Q7TRP5 306 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tbc1d17Q8BYH7 645 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ndc1Q8VCB1 673 aaKnown RBP16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rassf1Q99MK9 340 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Spata31d1aE9QA35 1336 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gstm1P10649 218 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kcnj11Q61743 390 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pias4Q9JM05 507 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cdh13Q9WTR5 714 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 PiggD3Z3Y1 983 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Prl4a1O35256 227 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Clec2lP0C7M9 211 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Fosl2P47930 326 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cmklr1P97468 371 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sox10Q04888 466 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pea15Q62048 130 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Znf786Q8BV42 777 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cmtr2Q8BWQ4 767 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rnf146Q9CZW6 359 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Actr6Q9D864 396 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Hspb3Q9QZ57 154 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 GabreA2AMW3 916 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Bcl2a1dO55179 172 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 AlplP09242 524 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sox8Q04886 464 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 CluQ06890 448 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tmem168Q91VX9 697 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Klhl1Q9JI74 751 aa16.26■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Brd7O88665 651 aaKnown RBP16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 F2P19221 618 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 IduaP48441 634 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Fitm2P59266 262 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 McidasQ3UZ45 379 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Elmod1Q3V1U8 326 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Abcg1Q64343 666 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cars2Q8BYM8 551 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr164Q8VF87 315 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Asb15Q8VHS6 583 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 5430401F13RikE9Q328 175 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm6619F6URP1 175 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr855Q7TRF8 312 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mkl1Q8K4J6 964 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Prl2c5Q9JLV9 222 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Esp22A8R0V4 111 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sema5bQ60519 1093 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr1288Q7TQY0 312 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sash3Q8K352 380 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Slc4a11A2AJN7 862 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tas2r129Q7M709 320 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vsig1Q9D2J4 407 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 TtpalQ9D3D0 343 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Oxct2bQ9ESL0 520 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Oxct2aQ9JJN4 520 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ralgps1A2AR50 585 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dsc2P55292 902 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dlg3P70175 849 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 ArhgdibQ61599 200 aaKnown RBP16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Best3Q6H1V1 669 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pcdh8Q7TSK3 1070 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rhbdl1Q8VC82 373 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dhx36Q8VHK9 1001 aaKnown RBP16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 KelQ9EQF2 713 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tnfsf9P41274 309 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms