RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CUEDC1Q9NWM3 386 aaPredicted RBP15.04■□□□□ -0
SNRNP48-203ENST00000634363 GPR83Q9NYM4 423 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 IL1RAPL1Q9NZN1 696 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 GNPTGQ9UJJ9 305 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 CHMP2BQ9UQN3 213 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 BTRCQ9Y297 605 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 VPS9D1Q9Y2B5 631 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 PCDHGB7Q9Y5F8 929 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 RP1L1Q8IWN7 2480 aaPredicted RBP15.04■□□□□ -0
SNRNP48-203ENST00000634363 SPTBN1Q01082 2364 aaKnown RBP15.04■□□□□ -0
SNRNP48-203ENST00000634363 CACNA1DQ01668 2161 aa15.04■□□□□ -0
SNRNP48-203ENST00000634363 CEACAM4O75871 244 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 COL8A1P27658 744 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 NDUFS1P28331 727 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 PRDX3P30048 256 aaKnown RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 OTX2P32243 289 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 ELK3P41970 407 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 RRADP55042 308 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 EIF3BP55884 814 aaKnown RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 CAV1Q03135 178 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 PDIA2Q13087 525 aaKnown RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 ATP1A4Q13733 1029 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 BOP1Q14137 746 aaKnown RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 HP1BP3Q5SSJ5 553 aaPredicted RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 SLC6A19Q695T7 634 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 CENPUQ71F23 418 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 KCNMB4Q86W47 210 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 CILP2Q8IUL8 1156 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 LMNTD2Q8IXW0 634 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 SYTL1Q8IYJ3 562 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 CARFQ8N187 725 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 ZBTB2Q8N680 514 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 RBMXL3Q8N7X1 1067 aaKnown RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 CEP112Q8N8E3 955 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 TMEM102Q8N9M5 508 aaPredicted RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 Q8NA96 180 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 PHC3Q8NDX5 983 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 ACVR1CQ8NER5 493 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 C19orf60Q96EN9 201 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 CFAP36Q96G28 342 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 PWWP2AQ96N64 755 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 PANX3Q96QZ0 392 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 NRTNQ99748 197 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 FAM167BQ9BTA0 163 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 SLC29A3Q9BZD2 475 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 PCMTD2Q9NV79 361 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 ZC3H7BQ9UGR2 993 aaKnown RBP15.03■□□□□ -0
SNRNP48-203ENST00000634363 POMT2Q9UKY4 750 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 HEBP2Q9Y5Z4 205 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 FAM169AQ9Y6X4 670 aa15.03■□□□□ -0
SNRNP48-203ENST00000634363 IFRD1O00458 451 aaPredicted RBP15.02■□□□□ -0
SNRNP48-203ENST00000634363 LIN7AO14910 233 aaPredicted RBP15.02■□□□□ -0
SNRNP48-203ENST00000634363 TP73O15350 636 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 CAPN1P07384 714 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 PVRP15151 417 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 ST6GAL1P15907 406 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 AGXTP21549 392 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 RPS3P23396 243 aaKnown RBP eCLIP15.02■□□□□ -0
SNRNP48-203ENST00000634363 RORAP35398 523 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 RPA4Q13156 261 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 MLIPQ5VWP3 458 aa15.02■□□□□ -0
SNRNP48-203ENST00000634363 INTS10Q9NVR2 710 aaKnown RBP15.02■□□□□ -0
SNRNP48-203ENST00000634363 SPTAN1Q13813 2472 aaKnown RBP15.02□□□□□ -0.01
SNRNP48-203ENST00000634363 C9J4A7 227 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 H3BMM5 538 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 MATN2O00339 956 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 BTN3A3O00478 584 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 ZNF749O43361 778 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 VARSP26640 1264 aaKnown RBP15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 PLTPP55058 493 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 SLC7A5Q01650 507 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 PLOD1Q02809 727 aaPredicted RBP15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 PRKG2Q13237 762 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 BRD3Q15059 726 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 TMED2Q15363 201 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 PLEKHN1Q494U1 663 aaPredicted RBP15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 HSP90AA5PQ58FG0 334 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 FAM198BQ6UWH4 519 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 ANKMY2Q8IV38 441 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 MMGT1Q8N4V1 131 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 CISD2Q8N5K1 135 aaKnown RBP15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 LPGAT1Q92604 370 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 N4BP2L2Q92802 583 aaPredicted RBP15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 PNPLA2Q96AD5 504 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 LRRC1Q9BTT6 524 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 CARD6Q9BX69 1037 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 P2RY12Q9H244 342 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 CCDC68Q9H2F9 335 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 XKR8Q9H6D3 395 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 SYTL2Q9HCH5 934 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 PPANQ9NQ55 473 aaKnown RBP15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 GRHL1Q9NZI5 618 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 CRYL1Q9Y2S2 319 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 TEX264Q9Y6I9 313 aa15.01□□□□□ -0.01
SNRNP48-203ENST00000634363 IQCF5A8MTL0 148 aa15□□□□□ -0.01
SNRNP48-203ENST00000634363 E7EQ34 232 aa15□□□□□ -0.01
SNRNP48-203ENST00000634363 E7ESA3 106 aa15□□□□□ -0.01
SNRNP48-203ENST00000634363 BTN3A1O00481 513 aa15□□□□□ -0.01
SNRNP48-203ENST00000634363 EIF3HO15372 352 aaKnown RBP eCLIP15□□□□□ -0.01
SNRNP48-203ENST00000634363 DDAH2O95865 285 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms