RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MAB21L1Q13394 359 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TTLL4Q14679 1199 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 KLHL12Q53G59 568 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ZC3H12BQ5HYM0 836 aaKnown RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 ZNF470Q6ECI4 717 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TAPT1Q6NXT6 567 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 RNF180Q86T96 592 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ACOT1Q86TX2 421 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 FCGR1BQ92637 280 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PYCR2Q96C36 320 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 RNF145Q96MT1 663 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 RBM4BQ9BQ04 359 aaKnown RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 FDXACB1Q9BRP7 624 aaPredicted RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 RBM4Q9BWF3 364 aaKnown RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 KCTD5Q9NXV2 234 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 C3orf18Q9UK00 162 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 LIPT1Q9Y234 373 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 FIS1Q9Y3D6 152 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 MAGED1Q9Y5V3 778 aaPredicted RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 TRAV20A0A0B4J274 112 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SEC14L5O43304 696 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 LGALS2P05162 132 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 CDK1P06493 297 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SERPINF2P08697 491 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SLC2A4P14672 509 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 AVPR1AP37288 418 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 CCT3P49368 545 aaKnown RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 GLUD2P49448 558 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SCN1BQ07699 218 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PCDH1Q08174 1060 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ZMAT1Q5H9K5 638 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 MPP7Q5T2T1 576 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 B3GNT8Q7Z7M8 397 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TRIM48Q8IWZ4 208 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ARL6IP6Q8N6S5 226 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 OR9I1Q8NGQ6 314 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 CNIH3Q8TBE1 160 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SIGLEC11Q96RL6 698 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SEPHS2Q99611 448 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TRIM54Q9BYV2 358 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TNKS2Q9H2K2 1166 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ALG2Q9H553 416 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 MROH8Q9H579 483 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 RUVBL2Q9Y230 463 aaKnown RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 ZCWPW2A0A1B0GU75 182 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 MROH6A6NGR9 719 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 KCNK1O00180 336 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 HBP1O60381 514 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TNFRSF21O75509 655 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PDE9AO76083 593 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 RAF1P04049 648 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TPOP07202 933 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SRCP12931 536 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SOX6P35712 828 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 LIPAP38571 399 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PPP3CCP48454 512 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 CLCNKAP51800 687 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 CDH13P55290 713 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ZNF91Q05481 1191 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 GRIK2Q13002 908 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 GRM3Q14832 879 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 POU4F3Q15319 338 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 GTDC1Q4AE62 458 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 COQ5Q5HYK3 327 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 GNASQ5JWF2 1037 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PAMR1Q6UXH9 720 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 KCNMB4Q86W47 210 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 FAM131BQ86XD5 332 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 ZSWIM9Q86XI8 627 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PROSER1Q86XN7 944 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SVOPLQ8N434 492 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SETD9Q8NE22 299 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 OR4D10Q8NGI6 311 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 STYXQ8WUJ0 223 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 TMEM125Q96AQ2 219 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PHF21AQ96BD5 680 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 PPIL3Q9H2H8 161 aaKnown RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 PRDM12Q9H4Q4 367 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 SMURF2Q9HAU4 748 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 C3orf14Q9HBI5 128 aa10.13□□□□□ -0.79
VPS11-207ENST00000620429 KLHL8Q9P2G9 620 aaPredicted RBP10.13□□□□□ -0.79
VPS11-207ENST00000620429 PQLC2LA1A4F0 135 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 SH3D21A4FU49 640 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 TARM1B6A8C7 271 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 RHOBTB1O94844 696 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 DNTTP04053 509 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 CYP11A1P05108 521 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 RPLP0P05388 317 aaKnown RBP10.12□□□□□ -0.79
VPS11-207ENST00000620429 HOXD8P13378 290 aaPredicted RBP10.12□□□□□ -0.79
VPS11-207ENST00000620429 ZNF3P17036 446 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 GPX3P22352 226 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 GADD45AP24522 165 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 TNFSF8P32971 234 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 MEOX2P50222 304 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 CSRP3P50461 194 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 CSTF3Q12996 717 aaKnown RBP10.12□□□□□ -0.79
VPS11-207ENST00000620429 USP10Q14694 798 aaKnown RBP10.12□□□□□ -0.79
VPS11-207ENST00000620429 GPR19Q15760 415 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 ZNF124Q15973 351 aa10.12□□□□□ -0.79
VPS11-207ENST00000620429 DUSP6Q16828 381 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms