RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 RPL3LQ92901 407 aaKnown RBP10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 EXOC2Q96KP1 924 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PPP3R2Q96LZ3 170 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 FUNDC2Q9BWH2 189 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CHID1Q9BWS9 393 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 FAM126AQ9BYI3 521 aaPredicted RBP10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GPR63Q9BZJ6 419 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CD244Q9BZW8 370 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CLPBQ9H078 707 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CPQQ9Y646 472 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LOC100506127A0A0U1RQW1 187 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GSTA4O15217 222 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PRAMEF12O95522 483 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 POU2F2P09086 479 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MPC1LP0DKB6 136 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 HNF1BP35680 557 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 AGTR2P50052 363 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NCS1P62166 190 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CDH18Q13634 790 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GTF2H3Q13889 308 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TAF12Q16514 161 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 INAVAQ3KP66 663 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 COLEC12Q5KU26 742 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TPRG1Q6ZUI0 275 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 HID1Q8IV36 788 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ADGRG5Q8IZF4 528 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TRPV3Q8NET8 790 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 OR7A2PQ8NGA2 310 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 OR2AP1Q8NGE2 309 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CNIH3Q8TBE1 160 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 STARD8Q92502 1023 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CLIP3Q96DZ5 547 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SLC22A12Q96S37 553 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 REXO4Q9GZR2 422 aaKnown RBP10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CD274Q9NZQ7 290 aa10.6□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.6□□□□□ -0.712e-8■□□□□ 10.5
SENP3-EIF4A1-201ENST00000614237 CLDN25C9JDP6 229 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TFECO14948 347 aaPredicted RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PQBP1O60828 265 aaKnown RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 FADS2O95864 444 aaKnown RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 FTH1P02794 183 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 BPIP17213 487 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PRDX3P30048 256 aaKnown RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CAPGP40121 348 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NSG1P42857 185 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MASP1P48740 699 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NEK2P51955 445 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 DCDC1P59894 354 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LIPEQ05469 1076 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ATP6AP1Q15904 470 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PLEKHG6Q3KR16 790 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ATP6AP1LQ52LC2 224 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 DLEU7Q6UYE1 221 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CCDC149Q6ZUS6 474 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NXPE1Q8N323 547 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SFRP1Q8N474 314 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ZBTB2Q8N680 514 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SCAIQ8N9R8 606 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 RHBDF1Q96CC6 855 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 RHNO1Q9BSD3 238 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 INTS7Q9NVH2 962 aaKnown RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 FCF1Q9Y324 198 aaKnown RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PRRG1O14668 218 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 BCAS1O75363 584 aaPredicted RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 DIRAS1O95057 198 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PRAMEF1O95521 474 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SERPINA4P29622 427 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CCT8P50990 548 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LMAN2Q12907 356 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PRKG2Q13237 762 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SP140Q13342 867 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 AQP6Q13520 282 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LETMD1Q6P1Q0 360 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LINGO4Q6UY18 593 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GAREM2Q75VX8 874 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 APCDD1Q8J025 514 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PAF1Q8N7H5 531 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CENPNQ96H22 339 aaPredicted RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 FCRL1Q96LA6 429 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CITED4Q96RK1 184 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CENPOQ9BU64 300 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ACTL8Q9H568 366 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ZDHHC3Q9NYG2 299 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ZMYM5Q9UJ78 669 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 UTS2RQ9UKP6 389 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NEUROG3Q9Y4Z2 214 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GLYATL1P3A0A0U1RQE8 302 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CCDC154A6NI56 674 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PAPLNO95428 1278 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SNRPD1P62314 119 aaKnown RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 BROXQ5VW32 411 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MSANTD1Q6ZTZ1 278 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PLD3Q8IV08 490 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CDK15Q96Q40 435 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 THUMPD3Q9BV44 507 aaKnown RBP10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GORASP2Q9H8Y8 452 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CD320Q9NPF0 282 aa10.59□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 KCTD5Q9NXV2 234 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms