RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CNTFP26441 200 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 PSMB5P28074 263 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 TSPAN7P41732 249 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 GABRA4P48169 554 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SEPHS1P49903 392 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 PNLIPRP1P54315 467 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SH3BP2P78314 561 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 FOXK2Q01167 660 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 MC2RQ01718 297 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 PRKAA1Q13131 559 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 CSHL1Q14406 222 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 OR4D1Q15615 310 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SLC5A12Q1EHB4 618 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SUSD1Q6UWL2 747 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SH2D5Q6ZV89 423 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 CLEC14AQ86T13 490 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 TDRPQ86YL5 185 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 CYP4X1Q8N118 509 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 D2HGDHQ8N465 521 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 PPFIBP2Q8ND30 876 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 AGBL5Q8NDL9 886 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 UBLCP1Q8WVY7 318 aaPredicted RBP13.26□□□□□ -0.29
VRK3-219ENST00000600137 NXNL1Q96CM4 212 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 CMKLR1Q99788 373 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 RAB11FIP5Q9BXF6 653 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 SPRY4Q9C004 299 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 FAM60AQ9NP50 221 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 LNPEPQ9UIQ6 1025 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 BTRCQ9Y297 605 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 ACOT9Q9Y305 439 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 KLK4Q9Y5K2 254 aa13.26□□□□□ -0.29
VRK3-219ENST00000600137 AHCTF1Q8WYP5 2266 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 A0A096LPK6 155 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 IGKV1-8A0A0C4DH67 115 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 FOXO6A8MYZ6 492 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 ISM1B1AKI9 464 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 C1QTNF9BB2RNN3 333 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 C9orf172C9J069 976 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 KRT38O76015 456 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 TUBBP07437 444 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 ENO2P09104 434 aaPredicted RBP13.25□□□□□ -0.29
VRK3-219ENST00000600137 C1QTNF9P0C862 333 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 FOLR1P15328 257 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 CYP2A7P20853 494 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 MAP4P27816 1152 aaKnown RBP13.25□□□□□ -0.29
VRK3-219ENST00000600137 TYK2P29597 1187 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
VRK3-219ENST00000600137 CSTF2P33240 577 aaKnown RBP eCLIP13.25□□□□□ -0.29
VRK3-219ENST00000600137 HSD17B2P37059 387 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 PPM1FP49593 454 aaPredicted RBP13.25□□□□□ -0.29
VRK3-219ENST00000600137 SERPINB8P50452 374 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 AP1S2P56377 157 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 ATP6V0D1P61421 351 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 GABREP78334 506 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 CDKL1Q00532 357 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 CYP4F3Q08477 520 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 RASA2Q15283 850 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 KIAA1614Q5VZ46 1190 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 FCRL6Q6DN72 434 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 ARMC6Q6NXE6 501 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 AGTRAPQ6RW13 159 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 TAX1BP1Q86VP1 789 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 KMT5CQ86Y97 462 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 TMEM151AQ8N4L1 468 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 OR56A3Q8NH54 315 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 OR2W6PQ8NHA6 318 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 KCTD4Q8WVF5 259 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 SMPDL3AQ92484 453 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 KIAA1191Q96A73 305 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 FBXL8Q96CD0 374 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 ATOH8Q96SQ7 321 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 SGPP1Q9BX95 441 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 CHRNA10Q9GZZ6 450 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 KLHL25Q9H0H3 589 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 APMAPQ9HDC9 416 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 FBXO8Q9NRD0 319 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 INTS7Q9NVH2 962 aaKnown RBP13.25□□□□□ -0.29
VRK3-219ENST00000600137 DKK4Q9UBT3 224 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 CTNNAL1Q9UBT7 734 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 KLHL20Q9Y2M5 609 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 OARD1Q9Y530 152 aa13.25□□□□□ -0.29
VRK3-219ENST00000600137 A0A087X1B8 175 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 A0A0J9YY10 115 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 EFCAB7A8K855 629 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 H3BMH7 237 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 TAPBPO15533 448 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 CTIFO43310 598 aaKnown RBP13.24□□□□□ -0.29
VRK3-219ENST00000600137 BRINP1O60477 761 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 RASSF9O75901 435 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 KLHL2O95198 593 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 ZBTB11O95625 1053 aaPredicted RBP13.24□□□□□ -0.29
VRK3-219ENST00000600137 SYF2O95926 243 aaKnown RBP13.24□□□□□ -0.29
VRK3-219ENST00000600137 LTA4HP09960 611 aaKnown RBP13.24□□□□□ -0.29
VRK3-219ENST00000600137 MTHFD2P13995 350 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 CDH3P22223 829 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 GRIA3P42263 894 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 HSD11B2P80365 405 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 KCNAB1Q14722 419 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 TGFBIQ15582 683 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms