RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 FAM26EQ8N5C1 309 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 ZNF655Q8N720 491 aaPredicted RBP13.81□□□□□ -0.2
MBD1-220ENST00000589758 OR2Y1Q8NGV0 311 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 CPT1CQ8TCG5 803 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 MAGEC3Q8TD91 643 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 PTERQ96BW5 349 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 FOPNLQ96NB1 174 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 SMAD5Q99717 465 aaKnown RBP13.81□□□□□ -0.2
MBD1-220ENST00000589758 KIFC1Q9BW19 673 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 C5AR2Q9P296 337 aa13.81□□□□□ -0.2
MBD1-220ENST00000589758 DHCR7Q9UBM7 475 aaKnown RBP13.81□□□□□ -0.2
MBD1-220ENST00000589758 PTRH2Q9Y3E5 179 aaKnown RBP13.81□□□□□ -0.2
MBD1-220ENST00000589758 A6NL46 340 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 ALAS2P22557 587 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 VARSP26640 1264 aaKnown RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 NMBRP28336 390 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 CCNFP41002 786 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 PAFAH1B1P43034 410 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 ETF1P62495 437 aaKnown RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 NADK2Q4G0N4 442 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 TCTE1Q5JU00 501 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 RNF187Q5TA31 235 aaPredicted RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 YOD1Q5VVQ6 348 aaPredicted RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 FIGLAQ6QHK4 219 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 MCATQ8IVS2 390 aaKnown RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 KLHL7Q8IXQ5 586 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 C2orf73Q8N5S3 287 aaPredicted RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 OTUD6BQ8N6M0 293 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 CLEC1AQ8NC01 280 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 GALNT11Q8NCW6 608 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 ZUFSPQ96AP4 578 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 NACC2Q96BF6 587 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 TRIM44Q96DX7 344 aaPredicted RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 C16orf45Q96MC5 204 aaPredicted RBP13.8□□□□□ -0.2
MBD1-220ENST00000589758 IL17FQ96PD4 163 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 TCF12Q99081 682 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 SEC16AO15027 2179 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 MED13Q9UHV7 2174 aa13.8□□□□□ -0.2
MBD1-220ENST00000589758 UBR5O95071 2799 aaPredicted RBP13.79□□□□□ -0.2
MBD1-220ENST00000589758 A0A1B0GX78 115 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 TARM1B6A8C7 271 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 H3BMM5 538 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 SORBS2O94875 1100 aaKnown RBP13.79□□□□□ -0.2
MBD1-220ENST00000589758 VAPBO95292 243 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 C1orf105O95561 183 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 MGAT1P26572 445 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 GCGRP47871 477 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 FNTAP49354 379 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 GRM7Q14831 915 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 PPP1R7Q15435 360 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 NKAIN1Q4KMZ8 207 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 JMJD6Q6NYC1 403 aaPredicted RBP13.79□□□□□ -0.2
MBD1-220ENST00000589758 MRGPREQ86SM8 312 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 FAM20CQ8IXL6 584 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 GRK7Q8WTQ7 553 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 SKA2Q8WVK7 121 aaPredicted RBP13.79□□□□□ -0.2
MBD1-220ENST00000589758 SLAMF7Q9NQ25 335 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 ENAMQ9NRM1 1142 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 SYBUQ9NX95 663 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 KLHL20Q9Y2M5 609 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 MAP4K5Q9Y4K4 846 aa13.79□□□□□ -0.2
MBD1-220ENST00000589758 TCRBV7S3A2A0A539 114 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 DSCR3O14972 297 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 PRICKLE3O43900 615 aaPredicted RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 SRPX2O60687 465 aaPredicted RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 IPO13O94829 963 aaKnown RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 ONECUT2O95948 504 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 ALBP02768 609 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 ESR1P03372 595 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 ALPPP05187 535 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 CTSBP07858 339 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 PAMP19021 973 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 OGNP20774 298 aaKnown RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 ADARP55265 1226 aaKnown RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 EIF3BP55884 814 aaKnown RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 SRSF1Q07955 248 aaKnown RBP eCLIP13.78□□□□□ -0.2
MBD1-220ENST00000589758 TYSND1Q2T9J0 566 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 DCAF10Q5QP82 559 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 VWA5B1Q5TIE3 1220 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 FCRL6Q6DN72 434 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 TTLL10Q6ZVT0 673 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 TAX1BP1Q86VP1 789 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 LMNTD1Q8N9Z9 388 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 TTC29Q8NA56 475 aaPredicted RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 HMGCLL1Q8TB92 370 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 PNPLA2Q96AD5 504 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 FKBP10Q96AY3 582 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 MFSD3Q96ES6 412 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 BIRC8Q96P09 236 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 SELENOSQ9BQE4 189 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 P4HTMQ9NXG6 502 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 SPATA7Q9P0W8 599 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 CIDEBQ9UHD4 219 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 VPS9D1Q9Y2B5 631 aa13.78□□□□□ -0.2
MBD1-220ENST00000589758 SNRNP200O75643 2136 aaKnown RBP13.78□□□□□ -0.2
MBD1-220ENST00000589758 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms