RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TPM1P09493 284 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 PRSS56P0CW18 603 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 NELFEP18615 380 aaKnown RBP6.06□□□□□ -1.44
NUP88-212ENST00000576708 AKT1P31749 480 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 CASRP41180 1078 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 HALP42357 657 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 ATP5OP48047 213 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 NR2C2P49116 596 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 CORO7P57737 925 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 TMPRSS15P98073 1019 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 SRSF1Q07955 248 aaKnown RBP eCLIP6.06□□□□□ -1.44
NUP88-212ENST00000576708 CHAF1BQ13112 559 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 XRCC4Q13426 336 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 DNASE1L3Q13609 305 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 SPARCL1Q14515 664 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 IL11RAQ14626 422 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 TESK1Q15569 626 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 GPR19Q15760 415 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 MLANAQ16655 118 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 LACTB2Q53H82 288 aaPredicted RBP6.06□□□□□ -1.44
NUP88-212ENST00000576708 TFDP3Q5H9I0 405 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 ZC3H12BQ5HYM0 836 aaKnown RBP6.06□□□□□ -1.44
NUP88-212ENST00000576708 PRAMEF17Q5VTA0 474 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 FAM69BQ5VUD6 431 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 AADACL2Q6P093 401 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 GLT6D1Q7Z4J2 308 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 PRSS42Q7Z5A4 293 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 DAAM2Q86T65 1068 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 PPP1R3BQ86XI6 285 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 CCDC50Q8IVM0 306 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 KATNAL2Q8IYT4 538 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 SIDT2Q8NBJ9 832 aaKnown RBP6.06□□□□□ -1.44
NUP88-212ENST00000576708 DDHD1Q8NEL9 900 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 OR4K2Q8NGD2 314 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 ZNF398Q8TD17 642 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 STAMBPL1Q96FJ0 436 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 ZDHHC12Q96GR4 267 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 SLC41A2Q96JW4 573 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 RMDN2Q96LZ7 410 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 QKIQ96PU8 341 aaKnown RBP eCLIP6.06□□□□□ -1.443e-6■■■■□ 21.1
NUP88-212ENST00000576708 EFHD1Q9BUP0 239 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 TWSG1Q9GZX9 223 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 TSPY26PQ9H489 355 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 TNFRSF12AQ9NP84 129 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 EPHA6Q9UF33 1036 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 TUBD1Q9UJT1 453 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 PADI1Q9ULC6 663 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 PLAAQ9Y263 795 aa6.06□□□□□ -1.44
NUP88-212ENST00000576708 ZNF106Q9H2Y7 1883 aaKnown RBP6.06□□□□□ -1.44
NUP88-212ENST00000576708 TLDC2A0PJX2 215 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 OR6C74A6NCV1 312 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 OR5K3A6NET4 321 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 GOLGA6L3A6NEY3 463 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 MGAT4DA6NG13 374 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 TOX3O15405 576 aaPredicted RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 CREG1O75629 220 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 LCA5LO95447 670 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 MTHFD1P11586 935 aaKnown RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 VCLP18206 1134 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 POLR2CP19387 275 aaPredicted RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 HLA-DPA1P20036 260 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 MSH3P20585 1137 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 PSMB4P28070 264 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 CDKN1CP49918 316 aaPredicted RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 KPNA2P52292 529 aaKnown RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 MLLT10P55197 1068 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 XIAPP98170 497 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 MC1RQ01726 317 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 OTUD4Q01804 1114 aaKnown RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 DMPKQ09013 629 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 MPP3Q13368 585 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 MSLNQ13421 630 aaPredicted RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 LSAMPQ13449 338 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 TUBB3Q13509 450 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 DNTTIP2Q5QJE6 756 aaKnown RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 LDLRAP1Q5SW96 308 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 METRNLQ641Q3 311 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 CPZQ66K79 652 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 LCN10Q6JVE6 187 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 BBS12Q6ZW61 710 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 BZW1Q7L1Q6 419 aaKnown RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 RBM12BQ8IXT5 1001 aaKnown RBP6.05□□□□□ -1.44
NUP88-212ENST00000576708 CFAP206Q8IYR0 622 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 RCOR2Q8IZ40 523 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 TC2NQ8N9U0 490 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 SLC38A9Q8NBW4 561 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 OR4E2Q8NGC2 313 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 OR13C4Q8NGS5 318 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 CCDC110Q8TBZ0 833 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 BRSK1Q8TDC3 778 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 C12orf66Q96MD2 445 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 CLUHP3Q96NS8 147 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 FSD1LQ9BXM9 530 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 RAB33BQ9H082 229 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 GBA3Q9H227 469 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 TRABDQ9H4I3 376 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 ACTL8Q9H568 366 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 ASB8Q9H765 288 aa6.05□□□□□ -1.44
NUP88-212ENST00000576708 LHX9Q9NQ69 397 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms