RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ATXN3P54252 364 aaPredicted RBP10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 IRF8Q02556 426 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 HHEXQ03014 270 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 TRIM61Q5EBN2 209 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 KLHL35Q6PF15 583 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 SLC23A3Q6PIS1 610 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 SPATA21Q7Z572 469 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 AMIGO1Q86WK6 493 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 MYLK4Q86YV6 388 aaPredicted RBP10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 KLHDC8AQ8IYD2 350 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 LSMEM2Q8N112 164 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 SFRP1Q8N474 314 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 ZNF781Q8N8C0 355 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 OR52E1Q8NGJ3 308 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 OR2L8Q8NGY9 312 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 AGR3Q8TD06 166 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 SLC22A18Q96BI1 424 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 PYCR2Q96C36 320 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 MOCOSQ96EN8 888 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 NSUN5Q96P11 429 aaKnown RBP10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 SORT1Q99523 831 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 PLCD4Q9BRC7 762 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 NTMT1Q9BV86 223 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 C20orf27Q9GZN8 174 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 IRF2BPLQ9H1B7 796 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 SRMSQ9H3Y6 488 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 ZNF395Q9H8N7 513 aaPredicted RBP10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 SLC40A1Q9NP59 571 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 ACSS2Q9NR19 701 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 PNPOQ9NVS9 261 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 OR6C2Q9NZP2 312 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 KLHL14Q9P2G3 628 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 ZNF624Q9P2J8 865 aaPredicted RBP10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 MARCOQ9UEW3 520 aaPredicted RBP10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 PLAGL1Q9UM63 463 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 APOBEC2Q9Y235 224 aaKnown RBP10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 MUC3AQ02505 3323 aa10.14□□□□□ -0.79
TMEM55B-205ENST00000554028 PLXND1Q9Y4D7 1925 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 A0A1B0GTQ1 180 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 FAM221BA6H8Z2 402 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 E7ENX8 843 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 KHNYNO15037 678 aaKnown RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HDAC3O15379 428 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 ZW10O43264 779 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 UGDHO60701 494 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 SDC3O75056 442 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 CCNDBP1O95273 360 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 EML2O95834 649 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 ENO1P06733 434 aaKnown RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 CELA2BP08218 269 aaPredicted RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 FGF4P08620 206 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 UROSP10746 265 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HGFP14210 728 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 MPSTP25325 297 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HMOX2P30519 316 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 PKLRP30613 574 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 CCR10P46092 362 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 PPM1FP49593 454 aaPredicted RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 ARFIP2P53365 341 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 TBPL1P62380 186 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 SH3BP2P78314 561 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 TAP2Q03519 686 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 GRIK2Q13002 908 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 GRB7Q14451 532 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 TERF2Q15554 542 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 LPAL2Q16609 132 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HIST2H2ACQ16777 129 aaPredicted RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 ZNF423Q2M1K9 1284 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 DEFB133Q30KQ1 61 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HLA-BQ31612 363 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 PAGE2BQ5JRK9 111 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 PRAMEF13Q5VWM6 474 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 CES4AQ5XG92 561 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HIST2H2AA3Q6FI13 130 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 ARMC6Q6NXE6 501 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 LCTLQ6UWM7 567 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 RPS27LQ71UM5 84 aaKnown RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 C17orf64Q86WR6 236 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 CACNA2D3Q8IZS8 1091 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 NAGSQ8N159 534 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 CCDC197Q8NCU1 140 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 PPFIBP2Q8ND30 876 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 OR4E2Q8NGC2 313 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HMGCLL1Q8TB92 370 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 METTL6Q8TCB7 284 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 SLC37A2Q8TED4 501 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 AGAP11Q8TF27 550 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 ZNF473Q8WTR7 871 aaKnown RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 RILPQ96NA2 401 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 IL17FQ96PD4 163 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 CCT7Q99832 543 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 DUSP23Q9BVJ7 150 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 SGPP1Q9BX95 441 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 GAREM1Q9H706 876 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 INTS7Q9NVH2 962 aaKnown RBP10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 TRPS1Q9UHF7 1281 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 ZDHHC2Q9UIJ5 367 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 HAO1Q9UJM8 370 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 GMEB2Q9UKD1 530 aa10.13□□□□□ -0.79
TMEM55B-205ENST00000554028 SNX6Q9UNH7 406 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms