RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 NDUFS3O75489 264 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 SLCO2B1O94956 709 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 CD63P08962 238 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 TPSB2P20231 275 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 PER3P56645 1201 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 SARNPP82979 210 aaKnown RBP15.6■□□□□ 0.09
DDX55-212ENST00000544738 TPSAB1Q15661 275 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 ZRSR2Q15696 482 aaKnown RBP15.6■□□□□ 0.09
DDX55-212ENST00000544738 KYNUQ16719 465 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 ARMC3Q5W041 872 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 LCN10Q6JVE6 187 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 LRRC8BQ6P9F7 803 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 TRIM73Q86UV7 250 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 DCUN1D3Q8IWE4 304 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 FLVCR1-AS1Q8TAF5 88 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 KIFC1Q9BW19 673 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 MRM3Q9HC36 420 aaKnown RBP15.6■□□□□ 0.09
DDX55-212ENST00000544738 FAM60AQ9NP50 221 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 MARCH4Q9P2E8 410 aaPredicted RBP15.6■□□□□ 0.09
DDX55-212ENST00000544738 B3GNT3Q9Y2A9 372 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 PADI2Q9Y2J8 665 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 NAV3Q8IVL0 2385 aa15.6■□□□□ 0.09
DDX55-212ENST00000544738 IQCF5A8MTL0 148 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 ZG16O60844 167 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 S1PR4O95977 384 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 CAPN1P07384 714 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 CD9P21926 228 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 RPS3P23396 243 aaKnown RBP eCLIP15.59■□□□□ 0.09
DDX55-212ENST00000544738 NMBRP28336 390 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 PKLRP30613 574 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 KCNJ1P48048 391 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 GLRBP48167 497 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 GABRA4P48169 554 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 CRADDP78560 199 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 NCF4Q15080 339 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 ZIC1Q15915 447 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 PTCHD3Q3KNS1 767 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 KRTAP21-3Q3LHN1 58 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 FAM69BQ5VUD6 431 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 MRNIPQ6NTE8 343 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 RHBDD2Q6NTF9 364 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 TLDC1Q6P9B6 456 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 FAM198BQ6UWH4 519 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 SDCCAG8Q86SQ7 713 aaPredicted RBP15.59■□□□□ 0.09
DDX55-212ENST00000544738 LDB1Q86U70 411 aaPredicted RBP15.59■□□□□ 0.09
DDX55-212ENST00000544738 VRK3Q8IV63 474 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 CFAP61Q8NHU2 1237 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 ADAMTS17Q8TE56 1095 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 TCF12Q99081 682 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 SMAD5Q99717 465 aaKnown RBP15.59■□□□□ 0.09
DDX55-212ENST00000544738 RAB11FIP5Q9BXF6 653 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 ILKAPQ9H0C8 392 aaPredicted RBP15.59■□□□□ 0.09
DDX55-212ENST00000544738 P2RY12Q9H244 342 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 PLAGL1Q9UM63 463 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 PLCL2Q9UPR0 1127 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 OSGIN2Q9Y236 505 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 SPTBP11277 2137 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 MED13LQ71F56 2210 aa15.59■□□□□ 0.09
DDX55-212ENST00000544738 DCHS2Q6V1P9 2916 aa15.58■□□□□ 0.09
DDX55-212ENST00000544738 MDC1Q14676 2089 aaKnown RBP15.58■□□□□ 0.09
DDX55-212ENST00000544738 H3BMH7 237 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 VAPBO95292 243 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 FKBP9O95302 570 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 MGAT1P26572 445 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 CXCR5P32302 372 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 RRADP55042 308 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 RNF187Q5TA31 235 aaPredicted RBP15.58■□□□□ 0.08
DDX55-212ENST00000544738 ZNF385CQ66K41 422 aaPredicted RBP15.58■□□□□ 0.08
DDX55-212ENST00000544738 MED25Q71SY5 747 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 OTOAQ7RTW8 1153 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 RAB43Q86YS6 212 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 KRT222Q8N1A0 295 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 DNAJC22Q8N4W6 341 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 OTUD6BQ8N6M0 293 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 TMEM102Q8N9M5 508 aaPredicted RBP15.58■□□□□ 0.08
DDX55-212ENST00000544738 OR2L8Q8NGY9 312 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 PROKR1Q8TCW9 393 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 LKAAEAR1Q8TD35 194 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 IP6K3Q96PC2 410 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 INTS7Q9NVH2 962 aaKnown RBP15.58■□□□□ 0.08
DDX55-212ENST00000544738 SLC39A10Q9ULF5 831 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 PPP2R2CQ9Y2T4 447 aa15.58■□□□□ 0.08
DDX55-212ENST00000544738 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 H3BMM5 538 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 ZSCAN9O15535 394 aaPredicted RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 PEBP1P30086 187 aaKnown RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 DCDP81605 110 aaKnown RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 CCZ1BP86790 482 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 CCZ1P86791 482 aaPredicted RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 DEFB110Q30KQ9 67 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 RAB42Q8N4Z0 105 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 PRELID2Q8N945 189 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 DENND1AQ8TEH3 1009 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 RAD51AP1Q96B01 352 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 MFSD3Q96ES6 412 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 FOPNLQ96NB1 174 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 NDC1Q9BTX1 674 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 SPRTNQ9H040 489 aaPredicted RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 TXLNGQ9NUQ3 528 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 IRAK4Q9NWZ3 460 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms