RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 HTR1EP28566 365 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 PLEKHG7Q6ZR37 379 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 ELMOD2Q8IZ81 293 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 OR8J3Q8NGG0 315 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 TMEM80Q96HE8 168 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 TMEM246Q9BRR3 403 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 CCDC32Q9BV29 185 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 COL20A1Q9P218 1284 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 MRTO4Q9UKD2 239 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 BTBD19C9JJ37 291 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 TSPAN1O60635 241 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 ITGA10O75578 1167 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 ELFN1P0C7U0 828 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 RPS3P23396 243 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 LCN1P31025 176 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 NSG1P42857 185 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 GBX2P52951 348 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 CRISP3P54108 245 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 ASB18Q6ZVZ8 466 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 ATCAYQ86WG3 371 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 OR10H5Q8NGA6 315 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 NDRG1Q92597 394 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF516Q92618 1163 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 ACBD6Q9BR61 282 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 MARK1Q9P0L2 795 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC27A6Q9Y2P4 619 aa14.65□□□□□ -0.06
SMARCA4-207ENST00000541122 AHSGP02765 367 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ENGP17813 658 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 SMSP52788 366 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 NFKB2Q00653 900 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 CRB2Q5IJ48 1285 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ZBED6CLQ96FA7 236 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ZNF599Q96NL3 588 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ZNF717Q9BY31 904 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 UCK2Q9BZX2 261 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ATG10Q9H0Y0 220 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 TNKS2Q9H2K2 1166 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 POPDC3Q9HBV1 291 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ARL6IP5O75915 188 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 PAFAH1B3Q15102 231 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ANKDD1AQ495B1 522 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 LRRC70Q7Z2Q7 622 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 CHERPQ8IWX8 916 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 BPIFB1Q8TDL5 484 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 CXorf40BQ96DE9 158 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 OXCT2Q9BYC2 517 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 BHLHE41Q9C0J9 482 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 FZD4Q9ULV1 537 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 MGAT4AQ9UM21 535 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 PDPK1O15530 556 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 HCN1O60741 890 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 BORAQ6PGQ7 559 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 RD3Q7Z3Z2 195 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 EXOSC8Q96B26 276 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 OSBPL2Q9H1P3 480 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 UBQLN2Q9UHD9 624 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 INMT-MINDY4F8WBC2 141 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 DNASE1L1P49184 302 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 NFATC3Q12968 1075 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 PAQR3Q6TCH7 311 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 SAMD14Q8IZD0 417 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 ZNF548Q8NEK5 533 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 OR9I1Q8NGQ6 314 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 LGR4Q9BXB1 951 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 FTHL17Q9BXU8 183 aa14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 FAM120CQ9NX05 1096 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-207ENST00000541122 M0R233 179 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 XKRYO14609 159 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 CD2P06729 351 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 CD97P48960 835 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 PPP5CP53041 499 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 UFM1P61960 85 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 NCEH1Q6PIU2 408 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 SNIP1Q8TAD8 396 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 NR4A3Q92570 626 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 DERL2Q9GZP9 239 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 RIMKLBQ9ULI2 386 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 SIX3O95343 332 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 RLN2P04090 185 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 H1F0P07305 194 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 ELK4P28324 431 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 PPP3R1P63098 170 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 GAD2Q05329 585 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 KCNAB2Q13303 367 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 FERD3LQ96RJ6 166 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 ZNF639Q9UID6 485 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 HCN2Q9UL51 889 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 PCDHB3Q9Y5E6 796 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 SNX10Q9Y5X0 201 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 A0A1B0GVM2 712 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 PLD2O14939 933 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 DFNA5O60443 496 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 GATBO75879 557 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 CELF2O95319 508 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 RELAQ04206 551 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 RABL3Q5HYI8 236 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 UBE2Q1Q7Z7E8 422 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 KBTBD6Q86V97 674 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 TMEM17Q86X19 198 aa14.63□□□□□ -0.07
SMARCA4-207ENST00000541122 TMEM199Q8N511 208 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms