RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 OR2L8Q8NGY9 312 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 RSC1A1Q92681 617 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 NAT6Q93015 286 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 MOCOSQ96EN8 888 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 CCDC3Q9BQI4 270 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 ACAT2Q9BWD1 397 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 CNOT10Q9H9A5 744 aaKnown RBP17.09■□□□□ 0.33
CTSB-222ENST00000531551 UCK1Q9HA47 277 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 OR6C2Q9NZP2 312 aa17.09■□□□□ 0.33
CTSB-222ENST00000531551 LILRA5A6NI73 299 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 ISM1B1AKI9 464 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 KLK8O60259 260 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 PROS1P07225 676 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 BPGMP07738 259 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 EEF1DP29692 281 aaKnown RBP17.08■□□□□ 0.33
CTSB-222ENST00000531551 WDR4P57081 412 aaKnown RBP17.08■□□□□ 0.33
CTSB-222ENST00000531551 PRKAA1Q13131 559 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 CCDC157Q569K6 752 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 CAPN13Q6MZZ7 669 aaPredicted RBP17.08■□□□□ 0.33
CTSB-222ENST00000531551 ARMC6Q6NXE6 501 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 OOSP2Q86WS3 158 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 NUDCD3Q8IVD9 361 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 SMPDL3AQ92484 453 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 CCDC126Q96EE4 140 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 CD244Q9BZW8 370 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 CCDC177Q9NQR7 707 aaPredicted RBP17.08■□□□□ 0.33
CTSB-222ENST00000531551 OXSMQ9NWU1 459 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 SLC22A14Q9Y267 594 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 ASB1Q9Y576 335 aa17.08■□□□□ 0.33
CTSB-222ENST00000531551 EP300Q09472 2414 aaPredicted RBP17.08■□□□□ 0.32
CTSB-222ENST00000531551 PIPSLA2A3N6 862 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 STK16O75716 305 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 CHRM5P08912 532 aaPredicted RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 ERGP11308 486 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 OAS2P29728 719 aaKnown RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 GPR3P46089 330 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 PRKAA2P54646 552 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 KLHL35Q6PF15 583 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 ZNF438Q7Z4V0 828 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 ADGRF3Q8IZF5 1079 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 CCNYL1Q8N7R7 359 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 DYDC1Q8WWB3 177 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 SREK1Q8WXA9 508 aaKnown RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 NCSTNQ92542 709 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 TMEM237Q96Q45 408 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 INTS7Q9NVH2 962 aaKnown RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 SPHK1Q9NYA1 384 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 ANGPTL3Q9Y5C1 460 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 TNPO3Q9Y5L0 923 aaKnown RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 STX16-NPEPL1H3BU86 382 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 STX16O14662 325 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 CASC3O15234 703 aaKnown RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 ZW10O43264 779 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 B4GAT1O43505 415 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 SUPT7LO94864 414 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 PSMB5P28074 263 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 EPHA4P54764 986 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 NFKB2Q00653 900 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 LIPMQ5VYY2 423 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 RPS27LQ71UM5 84 aaKnown RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 SPRED1Q7Z699 444 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 LRRC56Q8IYG6 542 aaPredicted RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 ARFGAP2Q8N6H7 521 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 OR56A3Q8NH54 315 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 INTS9Q9NV88 658 aaKnown RBP17.07■□□□□ 0.32
CTSB-222ENST00000531551 OPTCQ9UBM4 332 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 TAC3Q9UHF0 121 aa17.07■□□□□ 0.32
CTSB-222ENST00000531551 IGHV1OR21-1A0A087WYE8 117 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 FAM221BA6H8Z2 402 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 OR5K3A6NET4 321 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 TRIM13O60858 407 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 DHRS4L1P0CG22 281 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 PNLIPP16233 465 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 GGT5P36269 586 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 SLC6A12P48065 614 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 NAGLUP54802 743 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 SF1Q15637 639 aaKnown RBP17.06■□□□□ 0.32
CTSB-222ENST00000531551 CFAP157Q5JU67 520 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 IRGCQ6NXR0 463 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 ZCCHC23Q6ZST2 131 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 USP53Q70EK8 1073 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 THOC6Q86W42 341 aaKnown RBP17.06■□□□□ 0.32
CTSB-222ENST00000531551 TEX9Q8N6V9 391 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 SNX31Q8N9S9 440 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 FAM76AQ8TAV0 307 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 CDC6Q99741 560 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 ACTR10Q9NZ32 417 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 SPEGQ15772 3267 aa17.06■□□□□ 0.32
CTSB-222ENST00000531551 K7EPI3 171 aa17.05■□□□□ 0.32
CTSB-222ENST00000531551 DUX1O43812 170 aa17.05■□□□□ 0.32
CTSB-222ENST00000531551 CBFA2T3O75081 653 aa17.05■□□□□ 0.32
CTSB-222ENST00000531551 IMPDH1P20839 514 aa17.05■□□□□ 0.32
CTSB-222ENST00000531551 PEBP1P30086 187 aaKnown RBP17.05■□□□□ 0.32
CTSB-222ENST00000531551 CAPZBP47756 277 aa17.05■□□□□ 0.32
CTSB-222ENST00000531551 HERVK_113P63132 956 aa17.05■□□□□ 0.32
CTSB-222ENST00000531551 NR1D2Q14995 579 aa17.05■□□□□ 0.32
CTSB-222ENST00000531551 PCBP2Q15366 365 aaKnown RBP eCLIP17.05■□□□□ 0.32
CTSB-222ENST00000531551 ZNF678Q5SXM1 525 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms