RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 PPIP5K2O43314 1243 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 BUD23O43709 281 aaKnown RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SCO2O43819 266 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 HBP1O60381 514 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TBX19O60806 448 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 GAS7O60861 476 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 NDUFS2O75306 463 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 BCAS1O75363 584 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CSDE1O75534 798 aaKnown RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SCGB2A1O75556 95 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 RECQL5O94762 991 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 DDAH2O95865 285 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 F9P00740 461 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TK1P04183 234 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 MMP3P08254 477 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 ITGA5P08648 1049 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CD63P08962 238 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 OR2T7P0C7T2 308 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 FAM228BP0C875 321 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 UROSP10746 265 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 MCF2P10911 925 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 DBTP11182 482 aaKnown RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PEPDP12955 493 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 NQO2P16083 231 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 MSR1P21757 451 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CCNOP22674 350 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PIK3R1P27986 724 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 RBL1P28749 1068 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 HSD11B1P28845 292 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CRABP1P29762 137 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CCND3P30281 292 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CHRNA5P30532 468 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 HSPA9P38646 679 aaKnown RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PAFAH1B1P43034 410 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 GPD2P43304 727 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 KIR3DL1P43629 444 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 FASLGP48023 281 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CEBPGP53567 150 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 NRG3P56975 720 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 NUP107P57740 925 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 DCDC1P59894 354 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 UBE2G2P60604 165 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CSNK1G2P78368 415 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 HTRA4P83105 476 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 REEP5Q00765 189 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SIGLEC14Q08ET2 396 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 STX3Q13277 289 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 OLIG2Q13516 323 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TP53BP2Q13625 1128 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PTCH1Q13635 1447 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 FLOT2Q14254 428 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SMCO1Q147U7 214 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PCLAFQ15004 111 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SHBQ15464 509 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 GPR68Q15743 365 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 RAB30Q15771 203 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 STXBP2Q15833 593 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PPP1R3AQ16821 1122 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 HYAL4Q2M3T9 481 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PRICKLE4Q2TBC4 344 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 EDRF1Q3B7T1 1238 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 FAM135BQ49AJ0 1406 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CRY2Q49AN0 593 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CERKLQ49MI3 558 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TMEM35AQ53FP2 167 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TEX44Q53QW1 395 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 ZMAT1Q5H9K5 638 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 COQ5Q5HYK3 327 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 COLEC12Q5KU26 742 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TCHHL1Q5QJ38 904 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 DCST1Q5T197 706 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CCNYL2Q5T2Q4 361 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PXDC1Q5TGL8 231 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TDRD10Q5VZ19 366 aaKnown RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CARD17Q5XLA6 110 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 ANKS6Q68DC2 871 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 ZNF470Q6ECI4 717 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 WBP2NLQ6ICG8 309 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 OR6B2Q6IFH4 312 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 ANO7Q6IWH7 933 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 RGS7BPQ6MZT1 257 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 MRNIPQ6NTE8 343 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 ARMCX5Q6P1M9 558 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 MSANTD2Q6P1R3 559 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 RFWD3Q6PCD5 774 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CLEC9AQ6UXN8 241 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 WASH2PQ6VEQ5 465 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 NPSR1Q6W5P4 371 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PLEKHG7Q6ZR37 379 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 RNF207Q6ZRF8 634 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SLC16A12Q6ZSM3 486 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 NIPA1Q7RTP0 329 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TRAPPC11Q7Z392 1133 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 TRMT11Q7Z4G4 463 aaKnown RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SPATA19Q7Z5L4 167 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 ZNF605Q86T29 641 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 SETD3Q86TU7 594 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-216ENST00000529521 PPP1R3BQ86XI6 285 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 NUDCD3Q8IVD9 361 aa2.72□□□□□ -1.97
FDFT1-216ENST00000529521 CROCCP3Q8IVE0 287 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms