RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 HSCBQ8IWL3 235 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF611Q8N823 705 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF383Q8NA42 475 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 OR52N5Q8NH56 324 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 MUS81Q96NY9 551 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 RBM4Q9BWF3 364 aaKnown RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 PANK2Q9BZ23 570 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 S1PR5Q9H228 398 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 CPVLQ9H3G5 476 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 CACNG4Q9UBN1 327 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 DAPK2Q9UIK4 370 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 NOTCH4Q99466 2003 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 URADA6NGE7 173 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 C2orf81A6NN90 581 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 CCDC188H7C350 402 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 KLF11O14901 512 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 EDIL3O43854 480 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 DFFBO76075 338 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 RECQL5O94762 991 aaPredicted RBP3.32□□□□□ -1.88
VPS13B-207ENST00000518569 SLCO2B1O94956 709 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 CSN3P07498 182 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 FAM157CP0CG43 387 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 IGHV4-31P0DP07 118 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 HAPLN1P10915 354 aaPredicted RBP3.32□□□□□ -1.88
VPS13B-207ENST00000518569 PTPN3P26045 913 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 PTGER4P35408 488 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 MNDAP41218 407 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 TNNT2P45379 298 aaPredicted RBP3.32□□□□□ -1.88
VPS13B-207ENST00000518569 NR0B1P51843 470 aaKnown RBP3.32□□□□□ -1.88
VPS13B-207ENST00000518569 GNB1P62873 340 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 KLC1Q07866 573 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 CUL3Q13618 768 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 TEAD2Q15562 447 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 PHLDA2Q53GA4 152 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 C1orf141Q5JVX7 400 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 SPDYCQ5MJ68 293 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 C20orf194Q5TEA3 1177 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF449Q6P9G9 518 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 SH2D5Q6ZV89 423 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 ERN2Q76MJ5 926 aaKnown RBP3.32□□□□□ -1.88
VPS13B-207ENST00000518569 ARHGAP22Q7Z5H3 698 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 THAP8Q8NA92 274 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 OR6J1Q8NGC5 347 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 RSPH1Q8WYR4 309 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 CCDC47Q96A33 483 aaKnown RBP3.32□□□□□ -1.88
VPS13B-207ENST00000518569 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 CDHR1Q96JP9 859 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 CPNE1Q99829 537 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 MTMR12Q9C0I1 747 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 TSPY26PQ9H489 355 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF696Q9H7X3 374 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 CDH20Q9HBT6 801 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 GRID1Q9ULK0 1009 aa3.32□□□□□ -1.88
VPS13B-207ENST00000518569 DISP3Q9P2K9 1392 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 SYNRGQ9UMZ2 1314 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 ENO4A6NNW6 628 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 HHLA1C9JL84 531 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 O00370 1275 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 PSMD14O00487 310 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 SOCS5O75159 536 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 AP2A2O94973 939 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 APOA4P06727 396 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 TPM2P07951 284 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 CD48P09326 243 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 QDPRP09417 244 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 OR52Z1P0C646 297 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 IRF2P14316 349 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 EPCAMP16422 314 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 GNB3P16520 340 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 CD22P20273 847 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 WNT5AP41221 380 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 SSR1P43307 286 aaKnown RBP3.31□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF41P51814 821 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-207ENST00000518569 CRIP2P52943 208 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF415Q09FC8 603 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 ITGA9Q13797 1035 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 TNIP1Q15025 636 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 HYAL4Q2M3T9 481 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 MCMDC2Q4G0Z9 681 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 KRBOX4Q5JUW0 171 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 ADAM5Q6NVV9 412 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 C15orf39Q6ZRI6 1047 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 SLC16A9Q7RTY1 509 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 PIGZQ86VD9 579 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 NDUFAF2Q8N183 169 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 BMPERQ8N8U9 685 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 ZBTB8BQ8NAP8 495 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-207ENST00000518569 CAMKVQ8NCB2 501 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 OR11H4Q8NGC9 324 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 HPSE2Q8WWQ2 592 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 SPSB1Q96BD6 273 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 THOC1Q96FV9 657 aaKnown RBP3.31□□□□□ -1.88
VPS13B-207ENST00000518569 RADILQ96JH8 1075 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 LITAFQ99732 161 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 NAA11Q9BSU3 229 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-207ENST00000518569 URM1Q9BTM9 101 aaKnown RBP3.31□□□□□ -1.88
VPS13B-207ENST00000518569 ANP32EQ9BTT0 268 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 FSD1Q9BTV5 496 aa3.31□□□□□ -1.88
VPS13B-207ENST00000518569 AP1M1Q9BXS5 423 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms