RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PSMC6P62333 389 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 POU3F1Q03052 451 aaPredicted RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 GABPAQ06546 454 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 TRAF3Q13114 568 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 ZNF234Q14588 700 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 KRTCAP3Q53RY4 240 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 ALS2CLQ60I27 953 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 C16orf54Q6UWD8 224 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 CLEC17AQ6ZS10 378 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 TMEM173Q86WV6 379 aaPredicted RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 GALNT13Q8IUC8 556 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 CHERPQ8IWX8 916 aaKnown RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 ODF3L1Q8IXM7 274 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.06□□□□□ -1.76
HTT-210ENST00000512909 SAMD14Q8IZD0 417 aaPredicted RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 GBGT1Q8N5D6 347 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 ZNF114Q8NC26 417 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 ACVR1CQ8NER5 493 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 CHURC1Q8WUH1 139 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 SLC44A1Q8WWI5 657 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 OXNAD1Q96HP4 312 aaPredicted RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 FAM81BQ96LP2 452 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 ABHD1Q96SE0 405 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 SEPHS2Q99611 448 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 SLX1AQ9BQ83 275 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 FNDC11Q9BVV2 318 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 SEMA6AQ9H2E6 1030 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 SLCO5A1Q9H2Y9 848 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 OPA3Q9H6K4 179 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 C1RLQ9NZP8 487 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 NYAP2Q9P242 653 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 CTNNA3Q9UI47 895 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 GRIP1Q9Y3R0 1128 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 YIPF1Q9Y548 306 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 TRPV2Q9Y5S1 764 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 PCSK5Q92824 1860 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 PSME4Q14997 1843 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 UTRNP46939 3433 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 A0A0D9SFI3 127 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 TRBC2A0A5B9 178 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 MED19A0JLT2 244 aaPredicted RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 ERICH2A1L162 156 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 LILRA5A6NI73 299 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 MAGEB17A8MXT2 336 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 TMEM178BH3BS89 294 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 PLK4O00444 970 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 PAPSS1O43252 624 aaPredicted RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 ADAM20O43506 726 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SMAD6O43541 496 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 DKC1O60832 514 aaKnown RBP eCLIP4.05□□□□□ -1.76
HTT-210ENST00000512909 CNMDO75829 334 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 CSPG5O95196 566 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 NTN1O95631 604 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SLC25A27O95847 323 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 TRUB2O95900 331 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 NDUFB10O96000 172 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 FAM106CPP0CH98 169 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 HSPD1P10809 573 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 MYOD1P15172 320 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 PRLRP16471 622 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 THBS3P49746 956 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SUOXP51687 545 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 CSE1LP55060 971 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 RELQ04864 619 aaPredicted RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 SLC20A2Q08357 652 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 TRDNQ13061 729 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 NR1D2Q14995 579 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 IMMTQ16891 758 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 GAGE2EQ4V326 116 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 ZNF585BQ52M93 769 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 NDUFAF5Q5TEU4 345 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SNRNP48Q6IEG0 339 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 CAPRIN2Q6IMN6 1127 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 KIAA1161Q6NSJ0 714 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 GAGE2AQ6NT46 116 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SPSB3Q6PJ21 355 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 LONP2Q86WA8 852 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 TMPRSS12Q86WS5 348 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SLC38A9Q8NBW4 561 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SLC20A1Q8WUM9 679 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 PIBF1Q8WXW3 757 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 ESR2Q92731 530 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SEMA4DQ92854 862 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 ABTB1Q969K4 478 aaPredicted RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 RHBDF1Q96CC6 855 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 SPATA17Q96L03 361 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 MARK4Q96L34 752 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 C12orf42Q96LP6 360 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 DGAT2Q96PD7 388 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 NEK1Q96PY6 1258 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 C1QTNF4Q9BXJ3 329 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 RNF41Q9H4P4 317 aaPredicted RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 HHATLQ9HCP6 504 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 MIOSQ9NXC5 875 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 TRMT1Q9NXH9 659 aaKnown RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 DPP3Q9NY33 737 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 NFKBIL1Q9UBC1 381 aaPredicted RBP4.05□□□□□ -1.76
HTT-210ENST00000512909 GAGE2DQ9UEU5 116 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 NAP1L2Q9ULW6 460 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms